Gene detail

Detailed information of gene28508.t1 in Actinoscyphia liui

Genomic Location: chr9:16042693...16068901
NR annotation: XP_031560919.1, TNF receptor-associated factor 5-like, partial [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene28508.t1

ATGCCATTGTGGGTAAGTTCGAGGTCATGCCTGAACACCAACTGCACTTGGATAGGGTTAAGCGCCGAAAAAGAAAAGCATTATTCTGAATGCCCTTTCCTCGAGTCGATTTGCGACGATTGTGGGGTAAAGGGGATCAGAGAGTCAATGCAACACCACAATTCAGTTTGTTTGAGCAGAAAAGTGGACTGTGTTTACTGTCACAGTCCCATCAAGTTTTGTGACGTCGCAGCCCACCACGAGACCTGTGATGATAGGCCACGCAACTGTCCACTGCAGTGTGATGTACTTTTGTCAAGATCTCAACTTCATCTCCATCTAAGGAAGTGTCCTCAAAAGGACGTAGACTGTGAAGTGCCAGGCTGTTGTGCTCATTTTAAAATTGAAACAAAAGAAGAGCACAACAGAACTTTCAACGATTCGCATCACACGCTACTAATGGCAGAATTAGAAGATTTAAAGAGATGCATCTATGAAAAGGTATTATACGTCATGTCTATGTTATACGCTCAAGTTCAACCTACATACCCACAGTCAGGAACATCTACTACTGTTCAACCTACATACCCACAGTCAGGAACATCTACTACTGTTCAACCTCCAGACCCACAGTCAGGAACATCTACTGCTGTTCAACCTACAGAACCACAGTCAGGAACATCTACGACTGTTCAACCTGCATACCCACAGTCAAGAAGATCTACTGTTCAACCTACTGACCCGCAGTCAGGAAGATCTACTACTGTTCAACCTACAGAACCACAGTCAAGAATATCAACTGTTCAACCTACATACCCACAGTCAGGAACATCTACTACTGTTCAACCTACAGACCCACAGTCAGGAACATCTACTGGTAGATCTTATTACTCCACTCTGGAGAACACTGCACAAGTTGCAGATTCACTATATGTCATAAGTGATGATGACCAGGAAGGCAGCCATCAAGAACTAGAGGCTGCAGAGAATGATGACATCCAGAACATCATGGATGATAATGATGATTCTATTACTGGCATTATGCAAGGCAAATCGGATGATAAAGTCCTTATCATGGTTATTTTAAATAACCTAGACAAAAGGACCAAAGAAATAACAAGATTATTGAAAGCACTATACAACATAAATGGTAACCGCCTTTATTATTGGGTTGCAACTGCTGAGTCACCAGCTGGGAAAGAGGCCATTAAAACGTTGGATGTGTCACAACGCACCACCGAGTGTCTGGTAGTGACCAATGGTATCAATATAGGCAGGTTATCAGTTCTGACTTCTCCATTTATAAAAGGGCAAGAGCTAAATCAGCACAGAATTGAGACAGTCGAGAATGGGTTCCGCATTCAGGAATCCTTGAAAAGAGAACGACATGACACAGAAGCAGTCAGGAATCTTAAGAAGATTCAAGATGAAGAGTTTTGCATGACAAAAAAAAAAGATGAAGAAAATGATGCCAAAAGAGCAGCACAAATTTTAATTGAAGAGGTTACATTTCGATCTACATCGACGTCATTCAATAATACGTCAACAGAAACTGTGTTGGAGGCAGCTGTACCTGAGCCACCATTACATACCTTAATAAGGAAGCCAACTGCTATGCCACAACAAACAACAGTATCTGCAGAGAATGCACAATTAAAACAGTTGGCAATGGATCGAGAGGAAAGGTTGAAGAAAATTAAAAATCGAGAAGTTCAACCTACTGACCCACAGTCAGGAACATCTACTACTGTTCAATTACCTCCAGACCCACAGTCAGGAACATCTACTACTGTTCAACCTCCAGATCCACAGTCAGGAACATCTACTACTGTTCAACCTACTGACCCACAGTCAGGAACATCTACTACTGTTCAACCTACAGACCCACAGTCAGGAACATCTACTACTGTTCAACCTACAGACCCACAGTCAAGAAGATCTACTGTTCAACCTACATACCCACAGTCAGGAACATCTACTACTGTTCAACCTACTGACCCACAGTCAGGAACATCTACTACTGTTCAACCTACTGACGCACAGTCAGGAACATCTACTACTGGAAAAAGGAAAAGGCAAAGAAAAAAGAAGCAAAACGTTGTTGCCAGCAGATTAGGTGAGAAGGAAGAAGATCATCAGTCAGAACATTCAGCGAAGAAAAAAAGAAAAAGAACCAAGAAAAATAAACTACCACAGTGA

Transcript

gene28508.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan