Detailed information of gene29087.t1 in Actinoscyphia liui

Genomic Location: chr10:6793221...6796952
NR annotation: KFD50983.1, hypothetical protein M513_08166 [Trichuris suis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0CH28Polyubiquitin-C OS=Bos taurus OX=9913 GN=UBC PE=1 SV=1
P0CG66Polyubiquitin-C OS=Gorilla gorilla gorilla OX=9595 GN=UBC PE=3 SV=1
P0CG48Polyubiquitin-C OS=Homo sapiens OX=9606 GN=UBC PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan
IPR019956DomainUbiquitin domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019954Conserved_siteUbiquitin conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08770UBC; ubiquitin C-Ubiquitin systemko04121deepkoala

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