Gene detail

Detailed information of gene29638.t1 in Actinoscyphia liui

Genomic Location: chr10:17395653...17399664
NR annotation: WP_018963422.1, MULTISPECIES: cold-shock protein [Coprothermobacter]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P63237	Cold shock-like protein CspE OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=cspE PE=3 SV=2
P63238	Cold shock-like protein CspE OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=cspE PE=3 SV=2
Q89A90	Cold shock-like protein CspE OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=cspE PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00313	CSD	'Cold-shock' DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002059	Domain	Cold-shock protein, DNA-binding	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR050181	Family	Cold shock domain-containing protein	Interproscan
IPR011129	Domain	Cold shock domain	Interproscan
IPR019844	Domain	Cold-shock (CSD) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11544	COLD SHOCK DOMAIN CONTAINING PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan