Gene detail

Detailed information of pred2_44187.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_44187.1	INNER CENTROMERE PROTEIN	Sc3x4tf_199	2969042	2931221	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_44187.1

ATGGCGGTTGTTGTTAACTGAAAAGAAATGCCAACCATGGATAAAATGGTCCCACATATGTTGGGGTTGGATTTAGTGAGACAGATTGAGTATTTCACAAATGAAGCACTGGAATCCTTTGAAGAAGACTTTACCTGGTTGGATGAGATCCTGGAAACTGCCAAAATAGCTTTCCAAACCTCTCAAATTCAGACTCTACCTAAGACTCCATCTGCCAAGAGACGCAGAGGCAGAAAAAGAAAGAGTGATGTGCCATCTTTTATCCGAAGATCAAGCATTTTTCCAAAGGGCATCGACCAATCACTCAACGACTCTTACAATGCTGAAAATGTCCCTCCTACCCAGTTGAATACAAGTTCCACCTATGGTACACGCGCAACTAGAAACCTTCGGTCACGGCAAAAGGCAGATACGAATGGTGACCTATCCATTTGCAATACGTCTGTCTTGAGGACAAGGAACCTACGTAATACTTCTGCTCGGAAGAACACATTCATTGAAGCAGAGCTGAGCCCCACAAAAGAGATTTCTGAGTCTCCTGTGAAGAAAAAACTAGAGGAAAAGCCTCCTCAAGTGGATCAGCCTGAAGATGCAGCCCAGACAAAAATGGATGTCTGTGAAGACATTGAAACCAAAAACACAGTTACAGAACAAAGCTCACCTGTGGCTGACAAGGATCCTTCTCCTATTCAGATGGAAGCCAGTCCTCTCCAATCTGAGAAGCCATCTCCAGCAAAACCTGTCGAAAGTCCTGAAGTCTCTGCCACTAACAGTGGTGGTGAAAGCAGAGTAGTGAATAACAGTAGCTTTGTGATTGAAACTCCATCTGAAGAGGAATCTGCCTTGAACCTCCCTGTCATCACAAGTCCTGTAGAAGTTCTGGCCTCGGATAAGCCAGAAGCAATGGACACCGACTCTGGTGTCAACAGTGATGATAAGGAGCAGGATATACCACCACCAGAGACCAGTGAACATAGTGACGCAAAAGCAAACTCTGACGCTGATACAGAACGAGATACAGGCAAGCCGTCAAGTTCTGCCATGTCTTCTGAGGAAGTGAGTCAGGCTCCAAGGACTCGTACAAGAACTCGTAAGCAACAGCAGTCGGTGCCACCAGCCCAGCTTCCTGCACCCCACAGAGAGAGTATCTCTTCAACAACTAGTGCAGAATTGAATGAGGCCCCAACACGGATGACCCGATCAAGGATGCGTACAAAACCAGCTGCAACCACAGAACCTGTCTTGGTCCCTGTAGCTGCTAACCCTCCCGCAGAAACTTGCAATAGTGCAATGAATGAAGATAAACCAGAAGAAGCACCCAGGACCCGAACCAGAACACGGCTTCAGAAACGCCAGAGCTGTGAAATGGAAGGCCTAAAGGACAGTGAGACAAAGAGACAGTGCACAGAGCCCAAACCAGCCACCACAGAGAAACGGCGCAGTGCCAGGCTTAGTGCTAAGCAATCTGCTGTTAAGGAATCTCCGGAAGATGCAGACGCAGAAGACTCTGATCCTGAAGATGCTGATGTAACAAGCTCAGAATCTTGGATGGCACCTTCCACTTATAAAACTCCTAATAATTTGGCTACTTCTCGAAGTTTCTTAAACATGAACTCTAGTTACATGAGTGCAAACCGAACACCCTCACAGAAATCTTTCACTCTCTATAAGTATATTCAGCAGAATAGCTCCTTCACAGGTTCTGCTCAAAAATCAGGAACCCTCTCTCGTTTGAACCTCCTCTCTGGTCTTGGAGGCAATATAAAATCTTTGCTCAAGAAAACCACCACACCTGGCAAAGGGACTCCAAAAATTGGAAACAATCTGGAATACCTTGAACAAAGAAAGCGAGAGTTTGAGGAAAAACGCAAGAAGGAACAAGAAAGGCTGATGAAGAGAGAAGAATTGCAGAAGATGAAGTTGGAAGAAAGAAAAAAGAAAAGGGAAGAGAGGGTGCGTAAGGTAGCAGAGAGTCGGCAACTGAAAGAAATTCAGGAAAAAGAGTGGAAAGACAAGAAGTCTAAAAAACTAGAAGAAAAGCTCTCTGTCACTGATCGTCTCCGAGAAGAGAAACTCCGCGAGGAACGGGAAAAACTCAGATTACGATTAAGGAAACAGCAAGAAGCTGAAGAAAGAAGAAACCAAGAGGATGGCGAACGTACAAAGAAACTCAGGGAACAGGAAGAGGAGAACCAGCGTCATCAGTCGATGCTTCAGCGTAAAAAGGAGTTTGAAGAACAGGAGAGGCAGAGGAAATTGGCAGAAGACAAACGCAAATTAGAGGAACAAAAAGAACGAATGTTGGAAGCCGAAAAGGAGAAACAGAATGAATTGGAAAGACGACGGAGAATTGAGGAAGAAAGAGAGCGAGAGAGGCAGAAACTGAAAGACGAAAGAGAGAAAGAATATGCTCGCATCCGAGCTGAACAACGTGAATTACAAAAGGAAAAGCAAAAGGAGGCTGAAGACGCGCAGAGACAGAAATTACGTGAACTGGAACAAGAGCGATTGGCGTATGAACAACAGATGGCCGAGAAGAAGCAGCAGAGAGAGCAATATATTGCTAAAGTTCTCAATCAAAATTCCAGTGTCGTATCTCCTGCAGTAGCCCCCCTTTCGTTGTCATCTTCCTATCAGAAGGAAGTTGCAAGACCCATTGGTCAAAATACAACTTTTAACACAAGTTATAAGACAACTTCCAATCCTGATAGCTACCAGATGACGCCCTTAAGGAGCTCCTACAATAATTATGACATAGAAGGACTAAAATCTGATGATTCTACTGATGAAGAGGATGGTCCTCGTAAACCAATTCCCAGTTGGGCAACTGGTCCTGAATTGAAGATCGCTCTGCTGAAACAATATTACAATCCTCCCAATTTGGATCAGATATTTGTTCCAATTGAACTTCCAGATCTGAACGAGCTTTTTGTGAAAAAGAAGTCTCGCTTCAACAGGCGTACCAGTTCAGCTGTATGGGACAGTCCAATCCTCAGGTCCCACATCCCCCGGCCGAAATGGTGGTTGGCTGTAAGTGTGTTGCAGCAGCCATTAGTAGTGGGTGAGAGTGAAGAACAAGATACGAACGGCCATATTGGATTTTGGCGGGGCGAATACGAACAAAGACGCAATTTGTATAAACAACGTAAGATGGAAATGAATGTTATCTTATTCCGCAAACATTTGTTGATATCCGTCCTGTTTACG

Transcript

pred2_44187.1

ATGGCGGTTGTTGTTAACTGAAAAGAAATGCCAACCATGGATAAAATGGTCCCACATATGTTGGGGTTGGATTTAGTGAGACAGATTGAGTATTTCACAAATGAAGCACTGGAATCCTTTGAAGAAGACTTTACCTGGTTGGATGAGATCCTGGAAACTGCCAAAATAGCTTTCCAAACCTCTCAAATTCAGACTCTACCTAAGACTCCATCTGCCAAGAGACGCAGAGGCAGAAAAAGAAAGAGTGATGTGCCATCTTTTATCCGAAGATCAAGCATTTTTCCAAAGGGCATCGACCAATCACTCAACGACTCTTACAATGCTGAAAATGTCCCTCCTACCCAGTTGAATACAAGTTCCACCTATGGTACACGCGCAACTAGAAACCTTCGGTCACGGCAAAAGGCAGATACGAATGGTGACCTATCCATTTGCAATACGTCTGTCTTGAGGACAAGGAACCTACGTAATACTTCTGCTCGGAAGAACACATTCATTGAAGCAGAGCTGAGCCCCACAAAAGAGATTTCTGAGTCTCCTGTGAAGAAAAAACTAGAGGAAAAGCCTCCTCAAGTGGATCAGCCTGAAGATGCAGCCCAGACAAAAATGGATGTCTGTGAAGACATTGAAACCAAAAACACAGTTACAGAACAAAGCTCACCTGTGGCTGACAAGGATCCTTCTCCTATTCAGATGGAAGCCAGTCCTCTCCAATCTGAGAAGCCATCTCCAGCAAAACCTGTCGAAAGTCCTGAAGTCTCTGCCACTAACAGTGGTGGTGAAAGCAGAGTAGTGAATAACAGTAGCTTTGTGATTGAAACTCCATCTGAAGAGGAATCTGCCTTGAACCTCCCTGTCATCACAAGTCCTGTAGAAGTTCTGGCCTCGGATAAGCCAGAAGCAATGGACACCGACTCTGGTGTCAACAGTGATGATAAGGAGCAGGATATACCACCACCAGAGACCAGTGAACATAGTGACGCAAAAGCAAACTCTGACGCTGATACAGAACGAGATACAGGCAAGCCGTCAAGTTCTGCCATGTCTTCTGAGGAAGTGAGTCAGGCTCCAAGGACTCGTACAAGAACTCGTAAGCAACAGCAGTCGGTGCCACCAGCCCAGCTTCCTGCACCCCACAGAGAGAGTATCTCTTCAACAACTAGTGCAGAATTGAATGAGGCCCCAACACGGATGACCCGATCAAGGATGCGTACAAAACCAGCTGCAACCACAGAACCTGTCTTGGTCCCTGTAGCTGCTAACCCTCCCGCAGAAACTTGCAATAGTGCAATGAATGAAGATAAACCAGAAGAAGCACCCAGGACCCGAACCAGAACACGGCTTCAGAAACGCCAGAGCTGTGAAATGGAAGGCCTAAAGGACAGTGAGACAAAGAGACAGTGCACAGAGCCCAAACCAGCCACCACAGAGAAACGGCGCAGTGCCAGGCTTAGTGCTAAGCAATCTGCTGTTAAGGAATCTCCGGAAGATGCAGACGCAGAAGACTCTGATCCTGAAGATGCTGATGTAACAAGCTCAGAATCTTGGATGGCACCTTCCACTTATAAAACTCCTAATAATTTGGCTACTTCTCGAAGTTTCTTAAACATGAACTCTAGTTACATGAGTGCAAACCGAACACCCTCACAGAAATCTTTCACTCTCTATAAGTATATTCAGCAGAATAGCTCCTTCACAGGTTCTGCTCAAAAATCAGGAACCCTCTCTCGTTTGAACCTCCTCTCTGGTCTTGGAGGCAATATAAAATCTTTGCTCAAGAAAACCACCACACCTGGCAAAGGGACTCCAAAAATTGGAAACAATCTGGAATACCTTGAACAAAGAAAGCGAGAGTTTGAGGAAAAACGCAAGAAGGAACAAGAAAGGCTGATGAAGAGAGAAGAATTGCAGAAGATGAAGTTGGAAGAAAGAAAAAAGAAAAGGGAAGAGAGGGTGCGTAAGGTAGCAGAGAGTCGGCAACTGAAAGAAATTCAGGAAAAAGAGTGGAAAGACAAGAAGTCTAAAAAACTAGAAGAAAAGCTCTCTGTCACTGATCGTCTCCGAGAAGAGAAACTCCGCGAGGAACGGGAAAAACTCAGATTACGATTAAGGAAACAGCAAGAAGCTGAAGAAAGAAGAAACCAAGAGGATGGCGAACGTACAAAGAAACTCAGGGAACAGGAAGAGGAGAACCAGCGTCATCAGTCGATGCTTCAGCGTAAAAAGGAGTTTGAAGAACAGGAGAGGCAGAGGAAATTGGCAGAAGACAAACGCAAATTAGAGGAACAAAAAGAACGAATGTTGGAAGCCGAAAAGGAGAAACAGAATGAATTGGAAAGACGACGGAGAATTGAGGAAGAAAGAGAGCGAGAGAGGCAGAAACTGAAAGACGAAAGAGAGAAAGAATATGCTCGCATCCGAGCTGAACAACGTGAATTACAAAAGGAAAAGCAAAAGGAGGCTGAAGACGCGCAGAGACAGAAATTACGTGAACTGGAACAAGAGCGATTGGCGTATGAACAACAGATGGCCGAGAAGAAGCAGCAGAGAGAGCAATATATTGCTAAAGTTCTCAATCAAAATTCCAGTGTCGTATCTCCTGCAGTAGCCCCCCTTTCGTTGTCATCTTCCTATCAGAAGGAAGTTGCAAGACCCATTGGTCAAAATACAACTTTTAACACAAGTTATAAGACAACTTCCAATCCTGATAGCTACCAGATGACGCCCTTAAGGAGCTCCTACAATAATTATGACATAGAAGGACTAAAATCTGATGATTCTACTGATGAAGAGGATGGTCCTCGTAAACCAATTCCCAGTTGGGCAACTGGTCCTGAATTGAAGATCGCTCTGCTGAAACAATATTACAATCCTCCCAATTTGGATCAGATATTTGTTCCAATTGAACTTCCAGATCTGAACGAGCTTTTTGTGAAAAAGAAGTCTCGCTTCAACAGGCGTACCAGTTCAGCTGTATGGGACAGTCCAATCCTCAGGTCCCACATCCCCcggccGAAATGGTGGTTGGCTGTAAGTGTGTTGCAGCAGCCATTAGTAGTGGGTGAGAGTGAAGAACAAGATACGAACGGCCATATTGGATTTTGGCGGGGCGAATACGAACAAAGACGCAATTTGTATAAACAACGTAAGATGGAAATGAATGTTATCTTATTCCGCAAACATTTGTTGATATCCGTCCTGTTTACGTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03941	INCENP_ARK-bind	Inner centromere protein, ARK binding region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005635	Domain	Inner centromere protein, ARK-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13142	INNER CENTROMERE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000281	Biological Process	mitotic cytokinesis	Interproscan
GO:0000776	Cellular Component	kinetochore	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0030496	Cellular Component	midbody	Interproscan
GO:0032133	Cellular Component	chromosome passenger complex	Interproscan
GO:0051257	Biological Process	meiotic spindle midzone assembly	Interproscan
GO:0051310	Biological Process	metaphase chromosome alignment	Interproscan
GO:1990385	Cellular Component	meiotic spindle midzone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-