| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold537001_cov96_0.20 | 23S RRNA METHYLTRANSFERASE | scaffold537001_cov96 | 6701 | 7651 | - |
| CDS | |||||
| scaffold537001_cov96_0.20 | |||||
| Transcript |
| scaffold537001_cov96_0.20 |
| Protein |
| scaffold537001_cov96_0.20 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04055 | Radical_SAM | Radical SAM superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004383 | Family | Ribosomal RNA large subunit methyltransferase RlmN/Cfr | Interproscan |
| IPR006638 | Domain | Elp3/MiaA/NifB-like, radical SAM core domain | Interproscan |
| IPR007197 | Domain | Radical SAM | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR027492 | Family | Dual-specificity RNA methyltransferase RlmN | Interproscan |
| IPR040072 | Family | Methyltransferase (Class A) | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30544 | 23S RRNA METHYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0030488 | Biological Process | tRNA methylation | Interproscan |
| GO:0051536 | Molecular Function | iron-sulfur cluster binding | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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