Bathymodiolus brooksi is a species of deep-sea mussel in the family Mytilidae, commonly found in sulfide- and methane-rich hydrocarbon seeps in the Gulf of Mexico. This species harbors symbiotic bacteria in its gills, which enable it to thrive in extreme environments by oxidizing methane or hydrogen sulfide to produce organic compounds. Bathymodiolus brooksi plays a crucial role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Mytilida (Order); Mytiloidea (Superfamily); Modiolidae (Family); Bathymodiolinae (Subfamily); Bathymodiolus (Genus); Bathymodiolus brooksi (Species)
Bathymodiolus brooksi Gustafson, R. D. Turner, Lutz & Vrijenhoek, 1998
1. Gustafson R G, Turner R D, Lutz R A, et al. A new genus and five new species of mussels (Bivalvia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico[J]. Malacologia, 1998, 40(1-2): 63-112. (Gustafson et al., 1998)
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathymodiolus brooksi | Mollusca | - | Hydrothermal vent | 1,073-3,314 | cold seep location GC853 at the northern Gulf of Mexico (28.1237, −89.1404) | 206348 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| xbBatBroo1.1 | 2 Gb | Chromosome | 2023 | CAVMGF01 | WELLCOME SANGER INSTITUTE | PRJEB70452 | 94.00 | 130,400/2,900 | 35 | - | 34,012 |
| Gene ID | Description |
|---|---|
| ENSQHTP00000020162.1 | WU:FJ29H11 |
| ENSQHTP00000020163.1 | OVOCHYMASE-RELATED |
| ENSQHTP00000020164.1 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
| ENSQHTP00000020165.1 | TRANS-GOLGI PROTEIN GMX33 |
| ENSQHTP00000020166.1 | - |
| ENSQHTP00000020167.1 | SERINE PROTEASE FAMILY S1C HTRA-RELATED |
| ENSQHTP00000020168.1 | MATRIX METALLOPROTEINASE |
| ENSQHTP00000020169.1 | PROTEIN FOLDING REGULATOR |
| ENSQHTP00000020170.1 | FLAP ENDONUCLEASE FAMILY MEMBER |
| ENSQHTP00000020171.1 | C1ORF189 |
| ENSQHTP00000020172.1 | - |
| ENSQHTP00000020173.1 | OVOCHYMASE-RELATED |
| ENSQHTP00000020174.1 | BTG3-ASSOCIATED NUCLEAR PROTEIN BANP |
| ENSQHTP00000020175.1 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| ENSQHTP00000020176.1 | - |
| ENSQHTP00000020177.1 | PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3 |
| ENSQHTP00000020178.1 | - |
| ENSQHTP00000020179.1 | MATRIX METALLOPROTEINASE |
| ENSQHTP00000020180.1 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
| ENSQHTP00000020181.1 | PROTEIN PBDC1 |
