Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8058319.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058323.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058322.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058324.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058325.1 | |
| CAI8058326.1 | |
| CAI8058327.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058332.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058331.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058330.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058329.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8058328.1 | |
| CAI8058333.1 | |
| CAI8058334.1 | |
| CAI8058335.1 | METABOTROPIC GLUTAMATE RECEPTOR |
| CAI8058336.1 | METABOTROPIC GLUTAMATE RECEPTOR |
| CAI8058337.1 | OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR |
| CAI8058338.1 | |
| CAI8058339.1 | WSCD FAMILY MEMBER CG9164 |
| CAI8058341.1 | |
| CAI8058340.1 | |
| CAI8058345.1 | WSCD FAMILY MEMBER CG9164 |
| CAI8058344.1 | WSCD FAMILY MEMBER CG9164 |
| CAI8058343.1 | WSCD FAMILY MEMBER CG9164 |
| CAI8058342.1 | WSCD FAMILY MEMBER CG9164 |
| CAI8058346.1 | WSCD FAMILY MEMBER CG9164 |
| CAI8058347.1 | |
| CAI8058348.1 | |
| CAI8058350.1 | EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED |
| CAI8058349.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| CAI8058351.1 | |
| CAI8058354.1 | UNCHARACTERIZED |
| CAI8058352.1 | UNCHARACTERIZED |
| CAI8058353.1 | UNCHARACTERIZED |
| CAI8058355.1 | UNCHARACTERIZED |
| CAI8058356.1 | |
| CAI8058357.1 | TENASCIN |
| CAI8058358.1 | |
| CAI8058359.1 | |
| CAI8058360.1 | |
| CAI8058362.1 | |
| CAI8058361.1 | |
| CAI8058363.1 | SULFOTRANSFERASE DOMAIN-CONTAINING PROTEIN |
| CAI8058364.1 | RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 |
| CAI8058365.1 | RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 |
| CAI8058366.1 | |
| CAI8058367.1 | SULFOTRANSFERASE DOMAIN-CONTAINING PROTEIN |
| CAI8058368.1 | MULTI-COPPER OXIDASE |
| CAI8058369.1 | MULTI-COPPER OXIDASE |
| CAI8058370.1 | DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED |
