The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides00671 | |
| Paelopatides00672 | FERROCHELATASE |
| Paelopatides00673 | MUCIN-22 |
| Paelopatides00674 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| Paelopatides00675 | SI:CH211-196P9.1-RELATED |
| Paelopatides00676 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| Paelopatides00677 | PARANEOPLASTIC ANTIGEN |
| Paelopatides00678 | PROTEIN CBG26694 |
| Paelopatides00679 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| Paelopatides00680 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides00681 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides00682 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00683 | REVERSE TRANSCRIPTASES |
| Paelopatides00684 | EXODEOXYRIBONUCLEASE III |
| Paelopatides00685 | EXODEOXYRIBONUCLEASE III |
| Paelopatides00686 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides00687 | AGAP008228-PA |
| Paelopatides00688 | |
| Paelopatides00689 | |
| Paelopatides00690 | S -2-HYDROXY-ACID OXIDASE-RELATED |
| Paelopatides00691 | |
| Paelopatides00692 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00693 | CASPASE |
| Paelopatides00694 | GUANYLATE BINDING PROTEIN |
| Paelopatides00695 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides00696 | |
| Paelopatides00697 | TRICHOHYALIN-RELATED |
| Paelopatides00698 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
| Paelopatides00699 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00701 | |
| Paelopatides00702 | |
| Paelopatides00703 | |
| Paelopatides00704 | ENDONUCLEASE-RELATED |
| Paelopatides00705 | |
| Paelopatides00706 | |
| Paelopatides00707 | |
| Paelopatides00708 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides00709 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00710 | SPERM-SPECIFIC FAMILY, CLASS Q |
| Paelopatides00711 | DOUBLECORTIN DOMAIN CONTAINING 2 |
| Paelopatides00712 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides00713 | |
| Paelopatides00714 | NETRIN RECEPTOR UNC5 |
| Paelopatides00715 | |
| Paelopatides00716 | GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2 |
| Paelopatides00717 | |
| Paelopatides00718 | |
| Paelopatides00719 | |
| Paelopatides00720 | - |
| Paelopatides00721 |
