About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 1557 1558 1559 1560 1561 1562 1563 1564 1565 1566 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8028613.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
CAI8028612.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
CAI8028611.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
CAI8028610.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
CAI8028616.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
CAI8028615.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
CAI8028617.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
CAI8028618.1UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
CAI8028619.1EUKARYOTIC TRANSLATION INITIATION FACTOR 2A
CAI8028620.1-
CAI8028622.1SERINE-THREONINE PROTEIN KINASE
CAI8028623.1KELCH DOMAIN-CONTAINING PROTEIN
CAI8028621.1KELCH DOMAIN-CONTAINING PROTEIN
CAI8028624.1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
CAI8028627.1MALE FERTILITY FACTOR KL5
CAI8028626.1MALE FERTILITY FACTOR KL5
CAI8028625.1MALE FERTILITY FACTOR KL5
CAI8028628.1-
CAI8028629.1DYNEIN HEAVY CHAIN FAMILY PROTEIN
CAI8028630.1DYNEIN HEAVY CHAIN FAMILY PROTEIN
TOP