Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00008510 | DYNAMIN |
| SKAU_T00008520 | RAB FAMILY |
| SKAU_T00008530 | UBIQUITIN-LIKE PROTEIN 4A |
| SKAU_T00008540 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| SKAU_T00008550 | |
| SKAU_T00008560 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| SKAU_T00008570 | BRIDGING INTEGRATOR 3 |
| SKAU_T00008580 | |
| SKAU_T00008590 | |
| SKAU_T00008600 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00008610 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| SKAU_T00008620 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00008630 | GLUTAMINASE |
| SKAU_T00008640 | PROTEIN CBG26694 |
| SKAU_T00008650 | DNA POLYMERASE ALPHA CATALYTIC SUBUNIT |
| SKAU_T00008660 | EPH RECEPTOR A5 |
| SKAU_T00008670 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00008680 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
| SKAU_T00008690 | RHO FAMILY GTPASE |
| SKAU_T00008700 | INDOLEAMINE 2,3-DIOXYGENASE |
| SKAU_T00008710 | INDOLEAMINE 2,3-DIOXYGENASE |
| SKAU_T00008720 | |
| SKAU_T00008730 | |
| SKAU_T00008740 | STANNIOCALCIN |
| SKAU_T00008750 | HOMEOBOX PROTEIN NKX |
| SKAU_T00008760 | HOMEOBOX PROTEIN NKX |
| SKAU_T00008770 | MITOFERRIN-1-RELATED |
| SKAU_T00008780 | MITOFERRIN-1-RELATED |
| SKAU_T00008790 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| SKAU_T00008800 | CHARGED MULTIVESICULAR BODY PROTEIN |
| SKAU_T00008810 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN |
| SKAU_T00008820 | |
| SKAU_T00008830 | |
| SKAU_T00008840 | |
| SKAU_T00008850 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00008860 | FIBROBLAST GROWTH FACTOR RECEPTOR |
| SKAU_T00008870 | |
| SKAU_T00008880 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| SKAU_T00008890 | GONADOLIBERIN |
| SKAU_T00008900 | UNCHARACTERIZED |
| SKAU_T00008910 | ACTIN |
| SKAU_T00008920 | NEUROPEPTIDE Y RECEPTOR |
| SKAU_T00008930 | CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL |
| SKAU_T00008940 | RBP-RELATED |
| SKAU_T00008950 | CORTACTIN AND DREBRIN |
| SKAU_T00008960 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00008970 | |
| SKAU_T00008980 | TRANSCRIPTION FACTOR 7 FAMILY MEMBER |
| SKAU_T00008990 | UNCHARACTERIZED |
| SKAU_T00009000 | MRNA-CAPPING ENZYME |
