About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1980 1981 1982 1983 1984 1985 1986 1987 1988 1989 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides42509UNC-13-4A, ISOFORM B
Paelopatides42510REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42511COILED-COIL DOMAIN-CONTAINING PROTEIN 173
Paelopatides42512PER1-RELATED
Paelopatides42513PER1-RELATED
Paelopatides42514ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides42515-
Paelopatides42516ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides42517ZINC FINGER MYND DOMAIN-CONTAINING
Paelopatides42518-
Paelopatides42519EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
Paelopatides42520SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
Paelopatides42521PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides42524CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
Paelopatides42525CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
Paelopatides42526ZINC FINGER PROTEIN
Paelopatides42527-
Paelopatides4252852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides42529-
Paelopatides42530ENZYMATIC POLYPROTEIN-RELATED
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