About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 2087 2088 2089 2090 2091 2092 2093 2094 2095 2096 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8039211.1POLYPHOSPHATE:AMP PHOSPHOTRANSFERASE-RELATED
CAI8039212.1POLYPHOSPHATE:AMP PHOSPHOTRANSFERASE-RELATED
CAI8039213.1AMINO-ACID AMINOTRANSFERASE
CAI8039214.1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
CAI8039215.1REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
CAI8039216.1REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
CAI8039217.1ADENYLYLSULFATE REDUCTASE, BETA SUBUNIT
CAI8039218.1EUKARYOTIC TRANSLATION INITIATION FACTOR 6
CAI8039219.1-
CAI8039220.1GEO12009P1
CAI8039221.1THIOREDOXIN-LIKE PROTEIN 1
CAI8039224.1TRANSLATION INITIATION FACTOR IF-2-RELATED
CAI8039223.1TRANSLATION INITIATION FACTOR IF-2-RELATED
CAI8039222.1TRANSLATION INITIATION FACTOR IF-2-RELATED
CAI8039225.1NUCLEOSIDE DIPHOSPHATE KINASE
CAI8039226.140S RIBOSOMAL PROTEIN S12
CAI8039227.1-
CAI8039228.1FORMYLTETRAHYDROFOLATE DEFORMYLASE
CAI8039229.1SMALL NUCLEAR RIBONUCLEOPROTEIN
CAI8039230.1SMALL NUCLEAR RIBONUCLEOPROTEIN
TOP