About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 2104 2105 2106 2107 2108 2109 2110 2111 2112 2113 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8039551.14-HYDROXYPHENYLACETATE 3-MONOOXYGENASE-RELATED
CAI8039552.13-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE
CAI8039553.1-
CAI8039554.1TREHALASE
CAI8039555.1BLR5969 PROTEIN
CAI8039556.1CHLOROPHYLL SYNTHASE
CAI8039558.1ALANINE RACEMASE
CAI8039557.1ALANINE RACEMASE
CAI8039559.1PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE
CAI8039560.1PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE
CAI8039561.1PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE
CAI8039562.1VON HIPPEL-LINDAU PROTEIN
CAI8039563.1ATP SYNTHASE SUBUNIT A, CHLOROPLASTIC
CAI8039564.1-
CAI8039565.1ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL
CAI8039566.1ATP SYNTHASE GAMMA CHAIN
CAI8039567.1ATP SYNTHASE
CAI8039569.1REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX
CAI8039568.1REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX
CAI8039570.1SUCCINYL-COA SYNTHETASE BETA CHAIN
TOP