About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 2135 2136 2137 2138 2139 2140 2141 2142 2143 2144 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8040166.1DNA-DIRECTED RNA POLYMERASE
CAI8040167.1DNA-DIRECTED RNA POLYMERASE
CAI8040165.1DNA-DIRECTED RNA POLYMERASE
CAI8040164.1DNA-DIRECTED RNA POLYMERASE
CAI8040175.1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
CAI8040176.1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
CAI8040177.1COLLAGEN ALPHA
CAI8040178.1CYTOKINE RECEPTOR
CAI8040179.1ALDO/KETO REDUCTASE
CAI8040180.12,5-DIKETO-D-GLUCONIC ACID REDUCTASE
CAI8040181.1SPERM ASSOCIATED ANTIGEN 7
CAI8040182.1ZGC:194242
CAI8040183.1GUANYLATE BINDING PROTEIN
CAI8040184.1PROPANEDIOL UTILIZATION PROTEIN PDUA
CAI8040185.1PROPANEDIOL UTILIZATION PROTEIN PDUA
CAI8040186.1PHOSPHATE PROPANOYLTRANSFERASE
CAI8040187.1-
CAI8040188.1-
CAI8040189.1-
CAI8040190.1PROTEIN TOLQ
TOP