The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000026l.7 | GLUTATHIONE PEROXIDASE |
PMEG.utg000026l.8 | |
PMEG.utg000026l.9 | DNA LIGASE 4 |
PMEG.utg000027l.1 | MITOCHONDRIA-EATING PROTEIN-RELATED |
PMEG.utg000027l.10 | |
PMEG.utg000027l.101 | OVOCHYMASE-RELATED |
PMEG.utg000027l.102 | FGF RECEPTOR ACTIVATING PROTEIN 1 |
PMEG.utg000027l.103 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000027l.104 | SULFATE TRANSPORTER |
PMEG.utg000027l.105 | ANKYRIN DOMAIN-CONTAINING |
PMEG.utg000027l.106 | UNCHARACTERIZED |
PMEG.utg000027l.107 | RING FINGER PROTEIN 127 |
PMEG.utg000027l.108 | FIBROBLAST GROWTH FACTOR |
PMEG.utg000027l.109 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
PMEG.utg000027l.11 | |
PMEG.utg000027l.111 | |
PMEG.utg000027l.112 | |
PMEG.utg000027l.113 | |
PMEG.utg000027l.114 | DFG10 PROTEIN |
PMEG.utg000027l.115 | SIALATE O-ACETYLESTERASE |
PMEG.utg000027l.116 | PROTEIN INTURNED |
PMEG.utg000027l.117 | CARBONIC ANHYDRASE |
PMEG.utg000027l.118 | RED PROTEIN IK FACTOR CYTOKINE IK |
PMEG.utg000027l.119 | - |
PMEG.utg000027l.12 | |
PMEG.utg000027l.120 | |
PMEG.utg000027l.121 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000027l.122 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000027l.123 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000027l.13 | CADHERIN-87A |
PMEG.utg000027l.14 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000027l.15 | RAN GTPASE-ACTIVATING PROTEIN 1 |
PMEG.utg000027l.16 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
PMEG.utg000027l.17 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
PMEG.utg000027l.18 | LITHOSTATHINE |
PMEG.utg000027l.19 | SULFATE TRANSPORTER |
PMEG.utg000027l.2 | GABA-B RECEPTOR |
PMEG.utg000027l.20 | CARBONIC ANHYDRASE |
PMEG.utg000027l.22 | |
PMEG.utg000027l.24 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
PMEG.utg000027l.25 | CALPAIN |
PMEG.utg000027l.26 | GM2 GANGLIOSIDE ACTIVATOR PROTEIN |
PMEG.utg000027l.27 | GM2 GANGLIOSIDE ACTIVATOR PROTEIN |
PMEG.utg000027l.28 | TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER |
PMEG.utg000027l.3 | CADHERIN-87A |
PMEG.utg000027l.30 | |
PMEG.utg000027l.31 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000027l.32 | MCT-1 PROTEIN |
PMEG.utg000027l.33 | TRANSMEMBRANE PROTEIN 144 |
PMEG.utg000027l.34 | GM2 GANGLIOSIDE ACTIVATOR PROTEIN |