Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000001152.1 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| ENSZWYP00000001153.1 | |
| ENSZWYP00000001154.1 | |
| ENSZWYP00000001155.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| ENSZWYP00000001156.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| ENSZWYP00000001157.1 | FTP DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000001158.1 | RHO GTPASE-ACTIVATING PROTEIN 68F |
| ENSZWYP00000001159.1 | |
| ENSZWYP00000001160.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| ENSZWYP00000001161.1 | UNCHARACTERIZED |
| ENSZWYP00000001162.1 | |
| ENSZWYP00000001163.1 | RGD1565685 PROTEIN |
| ENSZWYP00000001164.1 | UNCHARACTERIZED |
| ENSZWYP00000001165.1 | |
| ENSZWYP00000001166.1 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| ENSZWYP00000001167.1 | COLLAGEN ALPHA |
| ENSZWYP00000001168.1 | RHO GTPASE-ACTIVATING PROTEIN 68F |
| ENSZWYP00000001169.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| ENSZWYP00000001170.1 | |
| ENSZWYP00000001171.1 | CYTOKINE RECEPTOR |
| ENSZWYP00000001172.1 | RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT |
| ENSZWYP00000001173.1 | |
| ENSZWYP00000001174.1 | METHYLOSOME PROTEIN 50 |
| ENSZWYP00000001175.1 | IRE1-RELATED |
| ENSZWYP00000001176.1 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| ENSZWYP00000001177.1 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
| ENSZWYP00000001178.1 | COLLAGEN ALPHA |
| ENSZWYP00000001179.1 | PROTEIN EVA-1 |
| ENSZWYP00000001180.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| ENSZWYP00000001181.1 | BARDET-BIEDL SYNDROME 12 PROTEIN |
| ENSZWYP00000001182.1 | |
| ENSZWYP00000001183.1 | XRP2 PROTEIN |
| ENSZWYP00000001184.1 | TROPONIN |
| ENSZWYP00000001185.1 | |
| ENSZWYP00000001186.1 | DNA2/NAM7 HELICASE FAMILY |
| ENSZWYP00000001187.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| ENSZWYP00000001188.1 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
| ENSZWYP00000001189.1 | COLLAGEN ALPHA |
| ENSZWYP00000001190.1 | CALCIUM-RESPONSIVE TRANSCRIPTION FACTOR |
| ENSZWYP00000001191.1 | XRP2 PROTEIN |
| ENSZWYP00000001192.1 | SPHINGOMYELINASE FAMILY MEMBER |
| ENSZWYP00000001193.1 | |
| ENSZWYP00000001194.1 | RETICULOCALBIN |
| ENSZWYP00000001195.1 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
| ENSZWYP00000001196.1 | |
| ENSZWYP00000001197.1 | DIGEORGE SYNDROME CRITICAL REGION 6 DGCR6 FAMILY MEMBER |
| ENSZWYP00000001198.1 | ZINC FINGER PROTEIN |
| ENSZWYP00000001199.1 | LY6/PLAUR DOMAIN-CONTAINING PROTEIN 6 |
| ENSZWYP00000001200.1 | XRP2 PROTEIN |
| ENSZWYP00000001201.1 |
