About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05032-
Paelopatides05033SIMILAR TO 1700123O20RIK PROTEIN
Paelopatides05034-
Paelopatides05035ZGC:174356
Paelopatides05036-
Paelopatides05037-
Paelopatides05038-
Paelopatides05039PROTEIN CBG26694
Paelopatides05040TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Paelopatides05041LYSYL OXIDASE-LIKE-RELATED
Paelopatides05042SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides05043BUCENTAUR RELATED
Paelopatides05044-
Paelopatides05045PROTEIN CBG26694
Paelopatides05046-
Paelopatides0504752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides05048UNCHARACTERIZED
Paelopatides05049-
Paelopatides05050SI:CH211-108C17.2-RELATED-RELATED
Paelopatides05051REVERSE TRANSCRIPTASES
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