About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 3045 3046 3047 3048 3049 3050 3051 3052 3053 3054 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8058371.1THIOREDOXIN REDUCTASE 1-RELATED-RELATED
CAI8058372.1THIOREDOXIN REDUCTASE 1-RELATED-RELATED
CAI8058373.1TRANSAMIDASE
CAI8058374.1-
CAI8058375.1-
CAI8058376.1FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE SLYD
CAI8058377.15-KETO-D-GLUCONATE 5-REDUCTASE
CAI8058378.1PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE SUBUNIT PURL
CAI8058379.1PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE SUBUNIT PURL
CAI8058380.1PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE SUBUNIT PURQ
CAI8058381.1ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 41, MITOCHONDRIAL
CAI8058382.1MITOGEN-ACTIVATED PROTEIN KINASE
CAI8058384.1-
CAI8058383.139S RIBOSOMAL PROTEIN L43
CAI8058385.1-
CAI8058386.1-
CAI8058387.1METHYLCOBAMIDE:COM METHYLTRANSFERASE MTBA
CAI8058388.1-
CAI8058389.12-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE
CAI8058390.1DEHYDROGENASES, SHORT CHAIN
TOP