About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Original Description/Redescription

1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)

Partial Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution/Locality

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
add.PMEG.utg000062l.129
add.PMEG.utg000062l.13OS10G0105400 PROTEIN
add.PMEG.utg000062l.130
add.PMEG.utg000062l.131
add.PMEG.utg000062l.13460 KDA RIBONUCLEOPROTEIN SSA/RO
add.PMEG.utg000062l.139
add.PMEG.utg000062l.14OS10G0105400 PROTEIN
add.PMEG.utg000062l.140SAM (S-ADENOSYL METHIONINE) TRANSPORTER
add.PMEG.utg000062l.15
add.PMEG.utg000062l.154
add.PMEG.utg000062l.157PROTEIN EVA-1
add.PMEG.utg000062l.161PROTEIN EVA-1
add.PMEG.utg000062l.192
add.PMEG.utg000062l.193IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
add.PMEG.utg000062l.194
add.PMEG.utg000062l.2
add.PMEG.utg000062l.228SULFATE TRANSPORTER
add.PMEG.utg000062l.23HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
add.PMEG.utg000062l.245NUCLEAR PROTEIN 1 AND 2
add.PMEG.utg000062l.246
add.PMEG.utg000062l.249LIN-24 (TWENTY-FOUR) LIKE
add.PMEG.utg000062l.25FMRFAMIDE RECEPTOR-RELATED
add.PMEG.utg000062l.250INTERFERON ALPHA-INDUCIBLE PROTEIN 27
add.PMEG.utg000062l.27TRANSCRIPTION FACTOR ONECUT
add.PMEG.utg000062l.3NEUROTRANSMITTER GATED ION CHANNEL
add.PMEG.utg000062l.30
add.PMEG.utg000062l.32PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED
add.PMEG.utg000062l.33PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED
add.PMEG.utg000062l.34PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED
add.PMEG.utg000062l.4
add.PMEG.utg000062l.5
add.PMEG.utg000062l.57
add.PMEG.utg000062l.6
add.PMEG.utg000062l.61
add.PMEG.utg000062l.62MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
add.PMEG.utg000062l.63
add.PMEG.utg000062l.64SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
add.PMEG.utg000062l.66
add.PMEG.utg000062l.67PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED
add.PMEG.utg000062l.7
add.PMEG.utg000062l.70
add.PMEG.utg000062l.74FAM124 DOMAIN-CONTAINING PROTEIN-RELATED
add.PMEG.utg000062l.8
add.PMEG.utg000062l.82
add.PMEG.utg000062l.84
add.PMEG.utg000062l.85L1 TRANSPOSABLE ELEMENT-RELATED
add.PMEG.utg000062l.88GALACTOSE-3-O-SULFOTRANSFERASE
add.PMEG.utg000062l.9
add.PMEG.utg000062l.90CARBOHYDRATE SULFOTRANSFERASE
add.PMEG.utg000062l.91CARBOHYDRATE SULFOTRANSFERASE
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