The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS17251 | UNCHARACTERIZED |
HS17252 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
HS17253 | EPH RECEPTOR A5 |
HS17254 | |
HS17255 | ACID PHOSPHATASE-RELATED |
HS17256 | MITOCHONDRIAL CARRIER PROTEIN RIM2 |
HS17257 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
HS17258 | CALSYNTENIN |
HS17259 | |
HS17260 | FATTY ACID BINDING PROTEIN |
HS17261 | COATOMER |
HS17262 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S22 |
HS17263 | FORKHEAD BOX PROTEIN |
HS17264 | PHOSPHATIDYLINOSITOL KINASE |
HS17265 | |
HS17266 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
HS17267 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
HS17268 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
HS17269 | CALCIUM-BINDING PROTEIN 39-RELATED |
HS17270 | |
HS17271 | INTEGRAL TRANSMEMBRANE PROTEIN 2 |
HS17272 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
HS17273 | RAB GDP/GTP EXCHANGE FACTOR |
HS17274 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
HS17275 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
HS17276 | CONNEXIN |
HS17277 | GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2 |
HS17278 | HISTONE H3 |
HS17279 | HOMEOBOX PROTEIN |
HS17280 | INOSITOL-TETRAKISPHOSPHATE 1-KINASE |
HS17281 | |
HS17282 | SERYL-TRNA SYNTHETASE |
HS17283 | KELCH PROTEIN |
HS17284 | F-BOX ONLY PROTEIN 34/46 FAMILY MEMBER |
HS17285 | - |
HS17286 | NUMB |
HS17287 | AGAP002036-PA |
HS17288 | HL01030P-RELATED |
HS17289 | ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1 |
HS17290 | EXPERIMENTAL AUTOIMMUNE PROSTATITIS ANTIGEN 2-RELATED |
HS17291 | BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE |
HS17292 | OVOCHYMASE-RELATED |
HS17293 | NUDIX HYDROLASE |
HS17294 | B-BOX DOMAIN CONTAINING |
HS17295 | CEREBELLIN-RELATED |
HS17296 | CEREBELLIN-RELATED |
HS17297 | CALPONIN |
HS17298 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
HS17299 | ASPARTYL PROTEASE-RELATED |
HS17300 | T-BOX PROTEIN-RELATED |