Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000001852.1 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| ENSZWYP00000001853.1 | BTK-BINDING PROTEIN-RELATED |
| ENSZWYP00000001854.1 | - |
| ENSZWYP00000001855.1 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| ENSZWYP00000001856.1 | PROTEASOME SUBUNIT ALPHA/BETA |
| ENSZWYP00000001857.1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| ENSZWYP00000001858.1 | |
| ENSZWYP00000001859.1 | FI23527P1 |
| ENSZWYP00000001860.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| ENSZWYP00000001861.1 | OVOCHYMASE-RELATED |
| ENSZWYP00000001862.1 | LEUCOKININ RECEPTOR-RELATED |
| ENSZWYP00000001863.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| ENSZWYP00000001864.1 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
| ENSZWYP00000001865.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| ENSZWYP00000001866.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| ENSZWYP00000001867.1 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
| ENSZWYP00000001868.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| ENSZWYP00000001869.1 | |
| ENSZWYP00000001870.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| ENSZWYP00000001871.1 | |
| ENSZWYP00000001872.1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| ENSZWYP00000001873.1 | |
| ENSZWYP00000001874.1 | - |
| ENSZWYP00000001875.1 | PDZ DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000001876.1 | |
| ENSZWYP00000001877.1 | INHIBITOR OF APOPTOSIS |
| ENSZWYP00000001878.1 | NUCLEAR HORMONE RECEPTOR |
| ENSZWYP00000001879.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| ENSZWYP00000001880.1 | DNA HELICASE RECQ FAMILY MEMBER |
| ENSZWYP00000001881.1 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| ENSZWYP00000001882.1 | DEOXYRIBOSE-PHOSPHATE ALDOLASE |
| ENSZWYP00000001883.1 | |
| ENSZWYP00000001884.1 | PDZ DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000001885.1 | NUCLEAR HORMONE RECEPTOR |
| ENSZWYP00000001886.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| ENSZWYP00000001887.1 | |
| ENSZWYP00000001888.1 | |
| ENSZWYP00000001889.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| ENSZWYP00000001890.1 | DEOXYRIBOSE-PHOSPHATE ALDOLASE |
| ENSZWYP00000001891.1 | |
| ENSZWYP00000001892.1 | REVERSE TRANSCRIPTASES |
| ENSZWYP00000001893.1 | NUCLEAR HORMONE RECEPTOR |
| ENSZWYP00000001894.1 | PDZ DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000001895.1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| ENSZWYP00000001896.1 | FMRFAMIDE RECEPTOR-RELATED |
| ENSZWYP00000001897.1 | SIALATE O-ACETYLESTERASE |
| ENSZWYP00000001898.1 | LD39211P |
| ENSZWYP00000001899.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| ENSZWYP00000001900.1 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| ENSZWYP00000001901.1 |
