About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898 near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold6792.18604
mRNA.BJAM.scaffold6792.18605PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE
mRNA.BJAM.scaffold6792.1860628S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL
mRNA.BJAM.scaffold6792.18607PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE
mRNA.BJAM.scaffold6793.18608DYNACTIN 1-RELATED MICROTUBULE-BINDING
mRNA.BJAM.scaffold6794.18609
mRNA.BJAM.scaffold6794.18610
mRNA.BJAM.scaffold6794.18611
mRNA.BJAM.scaffold6794.18612
mRNA.BJAM.scaffold6794.18613
mRNA.BJAM.scaffold6795.18614UNCHARACTERIZED
mRNA.BJAM.scaffold6795.18615
mRNA.BJAM.scaffold6795.18616
mRNA.BJAM.scaffold6795.18617UNCHARACTERIZED
mRNA.BJAM.scaffold6795.18618UNCHARACTERIZED
mRNA.BJAM.scaffold6795.18619PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold6795.18620APICAL PROTEIN/SHROOM-RELATED
mRNA.BJAM.scaffold6795.18621
mRNA.BJAM.scaffold6795.18622UNCHARACTERIZED
mRNA.BJAM.scaffold6795.18623
mRNA.BJAM.scaffold6798.18624
mRNA.BJAM.scaffold6798.18625
mRNA.BJAM.scaffold6798.18626ARRESTIN DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold6799.18627
mRNA.BJAM.scaffold6799.18628
mRNA.BJAM.scaffold6799.18629
mRNA.BJAM.scaffold6799.18630WD40 REPEAT PROTEIN
mRNA.BJAM.scaffold68.496
mRNA.BJAM.scaffold68.497TUMOR SUPPRESSOR P53-BINDING PROTEIN 1
mRNA.BJAM.scaffold68.498
mRNA.BJAM.scaffold68.499INHIBITOR OF APOPTOSIS
mRNA.BJAM.scaffold68.500GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold6800.18631
mRNA.BJAM.scaffold6801.18632
mRNA.BJAM.scaffold6802.18633ACROSIN-RELATED
mRNA.BJAM.scaffold6802.1863460S RIBOSOMAL PROTEIN L27
mRNA.BJAM.scaffold6802.18635
mRNA.BJAM.scaffold6809.18636ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold6809.18637ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold6809.18638
mRNA.BJAM.scaffold681.4631
mRNA.BJAM.scaffold681.4632MULTI-COPPER OXIDASE
mRNA.BJAM.scaffold681.4633MULTI-COPPER OXIDASE
mRNA.BJAM.scaffold681.4634PROTEIN, PUTATIVE-RELATED
mRNA.BJAM.scaffold681.4635
mRNA.BJAM.scaffold6812.18639ARYL HYDROCARBON RECEPTOR
mRNA.BJAM.scaffold6812.18640ARYL HYDROCARBON RECEPTOR
mRNA.BJAM.scaffold6812.18641
mRNA.BJAM.scaffold6813.18642EXTRA SPINDLE POLES 1-RELATED
mRNA.BJAM.scaffold6813.18643
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