The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g7862 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| MBSQW58_g7863 | INSULIN RECEPTOR SUBSTRATE |
| MBSQW58_g7864 | F-BOX ONLY PROTEIN 48-RELATED |
| MBSQW58_g7865 | PHOSPHATIDYLINOSITOL KINASE |
| MBSQW58_g7866 | |
| MBSQW58_g7867 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
| MBSQW58_g7868 | |
| MBSQW58_g7869 | |
| MBSQW58_g787 | CDK5 AND ABL1 ENZYME SUBSTRATE 1 |
| MBSQW58_g7870 | |
| MBSQW58_g7871 | |
| MBSQW58_g7872 | |
| MBSQW58_g7873 | G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g7874 | ACROSIN-RELATED |
| MBSQW58_g7875 | MDM2-BINDING PROTEIN |
| MBSQW58_g7876 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10 |
| MBSQW58_g7877 | CYTOCHROME C1 |
| MBSQW58_g7878 | GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN |
| MBSQW58_g7879 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| MBSQW58_g788 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| MBSQW58_g7880 | |
| MBSQW58_g7881 | |
| MBSQW58_g7882 | |
| MBSQW58_g7883 | L-FUCOSE KINASE |
| MBSQW58_g7884 | KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED |
| MBSQW58_g7885 | BTG3-ASSOCIATED NUCLEAR PROTEIN BANP |
| MBSQW58_g7886 | |
| MBSQW58_g7887 | |
| MBSQW58_g7888 | UNC-93 RELATED |
| MBSQW58_g7889 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| MBSQW58_g789 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| MBSQW58_g7890 | UNC-93 RELATED |
| MBSQW58_g7891 | DUAL SPECIFICITY PROTEIN KINASE |
| MBSQW58_g7892 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
| MBSQW58_g7893 | LIM/HOMEOBOX PROTEIN LHX |
| MBSQW58_g7894 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
| MBSQW58_g7895 | ZIPPER PUTATIVE TUMOR SUPPRESSOR 2 HOMOLOG-LIKE PROTEIN-RELATED |
| MBSQW58_g7896 | EPM2A-INTERACTING PROTEIN 1 |
| MBSQW58_g7897 | |
| MBSQW58_g7898 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| MBSQW58_g7899 | FMRFAMIDE RECEPTOR-RELATED |
| MBSQW58_g79 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
| MBSQW58_g790 | ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED |
| MBSQW58_g7900 | |
| MBSQW58_g7901 | |
| MBSQW58_g7902 | |
| MBSQW58_g7903 | |
| MBSQW58_g7904 | NADH-UBIQUINONE OXIDOREDUCTASE |
| MBSQW58_g7905 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 |
| MBSQW58_g7906 | ACTIN |
