Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000022552.1 | SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 |
| ENSZWYP00000022553.1 | |
| ENSZWYP00000022554.1 | TRYPSIN-RELATED |
| ENSZWYP00000022555.1 | ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN |
| ENSZWYP00000022556.1 | SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 |
| ENSZWYP00000022557.1 | ECSIT EVOLUTIONARILY CONSERVED SIGNALING INTERMEDIATE IN TOLL PATHWAYS |
| ENSZWYP00000022558.1 | ALPHA-L-FUCOSIDASE |
| ENSZWYP00000022559.1 | ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN |
| ENSZWYP00000022560.1 | INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN |
| ENSZWYP00000022561.1 | ENZYMATIC POLYPROTEIN-RELATED |
| ENSZWYP00000022562.1 | UNCHARACTERIZED |
| ENSZWYP00000022563.1 | DUF614 FAMILY PROTEIN-RELATED |
| ENSZWYP00000022564.1 | NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED |
| ENSZWYP00000022565.1 | SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 |
| ENSZWYP00000022566.1 | TIGHT JUNCTION PROTEIN |
| ENSZWYP00000022567.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| ENSZWYP00000022568.1 | RIBOSE-5-PHOSPHATE ISOMERASE |
| ENSZWYP00000022569.1 | GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88 |
| ENSZWYP00000022570.1 | METALLOPROTEASE TIKI |
| ENSZWYP00000022571.1 | |
| ENSZWYP00000022572.1 | DUF614 FAMILY PROTEIN-RELATED |
| ENSZWYP00000022573.1 | SUPPRESSOR OF FUSED |
| ENSZWYP00000022574.1 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
| ENSZWYP00000022575.1 | RIBOSE-5-PHOSPHATE ISOMERASE |
| ENSZWYP00000022576.1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| ENSZWYP00000022577.1 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| ENSZWYP00000022578.1 | DUF614 FAMILY PROTEIN-RELATED |
| ENSZWYP00000022579.1 | TIGHT JUNCTION PROTEIN |
| ENSZWYP00000022580.1 | NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED |
| ENSZWYP00000022581.1 | DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN |
| ENSZWYP00000022582.1 | PROPERDIN |
| ENSZWYP00000022583.1 | RIBOSE-5-PHOSPHATE ISOMERASE |
| ENSZWYP00000022584.1 | FI04643P-RELATED |
| ENSZWYP00000022585.1 | |
| ENSZWYP00000022586.1 | |
| ENSZWYP00000022587.1 | DNA POLYMERASE DELTA SUBUNIT 3 |
| ENSZWYP00000022588.1 | SULFIDE:QUINONE OXIDOREDUCTASE |
| ENSZWYP00000022589.1 | RIBOSE-5-PHOSPHATE ISOMERASE |
| ENSZWYP00000022590.1 | NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED |
| ENSZWYP00000022591.1 | PROTEIN C20ORF43 HOMOLOG |
| ENSZWYP00000022592.1 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| ENSZWYP00000022593.1 | TRANSMEMBRANE PROTEIN CCDC163 |
| ENSZWYP00000022594.1 | NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT |
| ENSZWYP00000022595.1 | |
| ENSZWYP00000022596.1 | |
| ENSZWYP00000022597.1 | |
| ENSZWYP00000022598.1 | FAM13 |
| ENSZWYP00000022599.1 | |
| ENSZWYP00000022600.1 | PROTEIN C20ORF43 HOMOLOG |
| ENSZWYP00000022601.1 | NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT |
