About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Deep sea, Vent field2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504796%37,037

References
TitleJournalPubmed ID
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

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Gene IDDescription
RPACG01983.1
RPACG01984.1
RPACG01985.1
RPACG01986.1
RPACG01987.1SI:CH211-171H4.7-RELATED
RPACG01987.2
RPACG01988.1AMINOMETHYLTRANSFERASE
RPACG01989.1BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1
RPACG01989.2
RPACG01990.1UNCHARACTERIZED
RPACG01991.1P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED
RPACG01992.1COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
RPACG01992.2
RPACG01993.1RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
RPACG01994.1
RPACG01995.1
RPACG01996.1
RPACG01997.1TRANSFERASE, PUTATIVE-RELATED
RPACG01998.1
RPACG01999.1TRANSFERASE, PUTATIVE-RELATED
RPACG02000.1
RPACG02000.2
RPACG02001.1
RPACG02002.1
RPACG02003.1
RPACG02004.1MATING RESPONSE PROTEIN POI2
RPACG02005.1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
RPACG02006.1ACETYLTRANSFERASE
RPACG02007.1
RPACG02008.1
RPACG02009.1
RPACG02010.1SIGNAL-TRANSDUCING ADAPTOR PROTEIN-RELATED
RPACG02011.1
RPACG02012.1
RPACG02013.1
RPACG02014.1
RPACG02014.2
RPACG02014.3
RPACG02014.4
RPACG02014.5
RPACG02015.1
RPACG02016.1
RPACG02017.1WD40 REPEAT DOMAIN 95
RPACG02018.1WD40 REPEAT DOMAIN 95
RPACG02019.1
RPACG02020.1
RPACG02021.1
RPACG02022.1
RPACG02023.1
RPACG02024.1
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