Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000024602.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| ENSZWYP00000024603.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
| ENSZWYP00000024604.1 | NADPH OXIDASE |
| ENSZWYP00000024605.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
| ENSZWYP00000024606.1 | |
| ENSZWYP00000024607.1 | |
| ENSZWYP00000024608.1 | |
| ENSZWYP00000024609.1 | |
| ENSZWYP00000024610.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| ENSZWYP00000024611.1 | |
| ENSZWYP00000024612.1 | |
| ENSZWYP00000024613.1 | PROTEIN CCSMST1 |
| ENSZWYP00000024614.1 | TIM23 |
| ENSZWYP00000024615.1 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 |
| ENSZWYP00000024616.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| ENSZWYP00000024617.1 | NIBRIN-RELATED |
| ENSZWYP00000024618.1 | NADPH OXIDASE |
| ENSZWYP00000024619.1 | TIM23 |
| ENSZWYP00000024620.1 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
| ENSZWYP00000024621.1 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 |
| ENSZWYP00000024622.1 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
| ENSZWYP00000024623.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| ENSZWYP00000024624.1 | |
| ENSZWYP00000024625.1 | |
| ENSZWYP00000024626.1 | STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 15 |
| ENSZWYP00000024627.1 | |
| ENSZWYP00000024628.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| ENSZWYP00000024629.1 | GLIAL CELLS MISSING RELATED/GLIDE |
| ENSZWYP00000024630.1 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
| ENSZWYP00000024631.1 | NAD(P)H-HYDRATE EPIMERASE |
| ENSZWYP00000024632.1 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
| ENSZWYP00000024633.1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| ENSZWYP00000024634.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| ENSZWYP00000024635.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000024636.1 | |
| ENSZWYP00000024637.1 | - |
| ENSZWYP00000024638.1 | NAD(P)H-HYDRATE EPIMERASE |
| ENSZWYP00000024639.1 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
| ENSZWYP00000024640.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| ENSZWYP00000024641.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| ENSZWYP00000024642.1 | |
| ENSZWYP00000024643.1 | OVOCHYMASE-RELATED |
| ENSZWYP00000024644.1 | PEROXISOMAL MEMBRANE PROTEIN PEX13 |
| ENSZWYP00000024645.1 | UNCHARACTERIZED |
| ENSZWYP00000024646.1 | FTP DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000024647.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| ENSZWYP00000024648.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| ENSZWYP00000024649.1 | ACETYL-COENZYME A SYNTHETASE |
| ENSZWYP00000024650.1 | UNCHARACTERIZED |
| ENSZWYP00000024651.1 |
