Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000025752.1 | |
| ENSZWYP00000025753.1 | |
| ENSZWYP00000025754.1 | UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED |
| ENSZWYP00000025755.1 | UNCHARACTERIZED |
| ENSZWYP00000025756.1 | |
| ENSZWYP00000025757.1 | ALANYL-TRNA SYNTHETASE |
| ENSZWYP00000025758.1 | |
| ENSZWYP00000025759.1 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN |
| ENSZWYP00000025760.1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| ENSZWYP00000025761.1 | ALANYL-TRNA SYNTHETASE |
| ENSZWYP00000025762.1 | POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 |
| ENSZWYP00000025763.1 | |
| ENSZWYP00000025764.1 | LEUCOKININ RECEPTOR-RELATED |
| ENSZWYP00000025765.1 | ALANYL-TRNA SYNTHETASE |
| ENSZWYP00000025766.1 | |
| ENSZWYP00000025767.1 | |
| ENSZWYP00000025768.1 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| ENSZWYP00000025769.1 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000025770.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| ENSZWYP00000025771.1 | ORGANIC SOLUTE TRANSPORTER-RELATED |
| ENSZWYP00000025772.1 | |
| ENSZWYP00000025773.1 | SEC14 RELATED PROTEIN |
| ENSZWYP00000025774.1 | ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL |
| ENSZWYP00000025775.1 | N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT |
| ENSZWYP00000025776.1 | POLY [ADP-RIBOSE] POLYMERASE |
| ENSZWYP00000025777.1 | UNCHARACTERIZED |
| ENSZWYP00000025778.1 | ORGANIC SOLUTE TRANSPORTER-RELATED |
| ENSZWYP00000025779.1 | UNCHARACTERIZED |
| ENSZWYP00000025780.1 | SOLUTE CARRIER FAMILY 17 |
| ENSZWYP00000025781.1 | |
| ENSZWYP00000025782.1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| ENSZWYP00000025783.1 | SEC14 RELATED PROTEIN |
| ENSZWYP00000025784.1 | GLR0591 PROTEIN |
| ENSZWYP00000025785.1 | UNCHARACTERIZED |
| ENSZWYP00000025786.1 | ATP-DEPENDENT PROTEASE |
| ENSZWYP00000025787.1 | |
| ENSZWYP00000025788.1 | SOLUTE CARRIER FAMILY 17 |
| ENSZWYP00000025789.1 | RHO FAMILY GTPASE |
| ENSZWYP00000025790.1 | UNCHARACTERIZED |
| ENSZWYP00000025791.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| ENSZWYP00000025792.1 | RHO FAMILY GTPASE |
| ENSZWYP00000025793.1 | ANOCTAMIN |
| ENSZWYP00000025794.1 | - |
| ENSZWYP00000025795.1 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| ENSZWYP00000025796.1 | ATP-DEPENDENT PROTEASE |
| ENSZWYP00000025797.1 | PROTEIN NJMU-R1 |
| ENSZWYP00000025798.1 | SERINE/THREONINE-PROTEIN KINASE NEK |
| ENSZWYP00000025799.1 | |
| ENSZWYP00000025800.1 | |
| ENSZWYP00000025801.1 |
