Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000027452.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| ENSZWYP00000027453.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4 |
| ENSZWYP00000027454.1 | SI:CH211-108C17.2-RELATED-RELATED |
| ENSZWYP00000027455.1 | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE |
| ENSZWYP00000027456.1 | FOLLISTATIN-RELATED |
| ENSZWYP00000027457.1 | TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER |
| ENSZWYP00000027458.1 | NUCLEAR RECEPTOR COACTIVATOR 5-RELATED |
| ENSZWYP00000027459.1 | |
| ENSZWYP00000027460.1 | |
| ENSZWYP00000027461.1 | |
| ENSZWYP00000027462.1 | |
| ENSZWYP00000027463.1 | ZINC FINGER PROTEIN |
| ENSZWYP00000027464.1 | DNA REPLICATION FACTOR CDT1 |
| ENSZWYP00000027465.1 | |
| ENSZWYP00000027466.1 | TROPONIN C-AKIN-1 PROTEIN |
| ENSZWYP00000027467.1 | NUCLEAR RECEPTOR COACTIVATOR 5-RELATED |
| ENSZWYP00000027468.1 | |
| ENSZWYP00000027469.1 | TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER |
| ENSZWYP00000027470.1 | TRANSLATION FACTOR |
| ENSZWYP00000027471.1 | SERINE/THREONINE-PROTEIN KINASE 19 |
| ENSZWYP00000027472.1 | SPHINGOSINE KINASE |
| ENSZWYP00000027473.1 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| ENSZWYP00000027474.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| ENSZWYP00000027475.1 | TROPONIN C-AKIN-1 PROTEIN |
| ENSZWYP00000027476.1 | |
| ENSZWYP00000027477.1 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| ENSZWYP00000027478.1 | SERINE/THREONINE-PROTEIN KINASE 19 |
| ENSZWYP00000027479.1 | |
| ENSZWYP00000027480.1 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
| ENSZWYP00000027481.1 | SODIUM/HYDROGEN EXCHANGER |
| ENSZWYP00000027482.1 | UNCHARACTERIZED |
| ENSZWYP00000027483.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| ENSZWYP00000027484.1 | NG5 |
| ENSZWYP00000027485.1 | |
| ENSZWYP00000027486.1 | |
| ENSZWYP00000027487.1 | |
| ENSZWYP00000027488.1 | FRUCTOSE-2,6-BISPHOSPHATASE TIGAR |
| ENSZWYP00000027489.1 | |
| ENSZWYP00000027490.1 | VACUOLAR SORTING PROTEIN 35 |
| ENSZWYP00000027491.1 | GLYCINE-, GLUTAMATE-, THIENYLCYCLOHEXYLPIPERIDINE-BINDING PROTEIN |
| ENSZWYP00000027492.1 | |
| ENSZWYP00000027493.1 | 28S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL |
| ENSZWYP00000027494.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
| ENSZWYP00000027495.1 | YNEIN REGULATORY COMPLEX SUBUNIT 5 |
| ENSZWYP00000027496.1 | DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL |
| ENSZWYP00000027497.1 | |
| ENSZWYP00000027498.1 | RAN GTPASE-ACTIVATING PROTEIN 1 |
| ENSZWYP00000027499.1 | CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 |
| ENSZWYP00000027500.1 | |
| ENSZWYP00000027501.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
