Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s159.g0001.t1 | |
| Lsat_s159.g0002.t1 | |
| Lsat_s159.g0003.t1 | |
| Lsat_s159.g0004.t1 | BONE MARROW PROTEOGLYCAN |
| Lsat_s159.g0005.t1 | |
| Lsat_s160.g0001.t1 | GENERAL VESICULAR TRANSPORT FACTOR P115 |
| Lsat_s160.g0002.t1 | FAM13 |
| Lsat_s160.g0003.t1 | AMSH-LIKE PROTEASE |
| Lsat_s160.g0004.t1 | UNCHARACTERIZED |
| Lsat_s160.g0005.t1 | FATTY ACID ACYL TRANSFERASE-RELATED |
| Lsat_s160.g0006.t1 | |
| Lsat_s160.g0007.t1 | PROTEASE M14 CARBOXYPEPTIDASE |
| Lsat_s160.g0008.t1 | HIGH MOBILITY GROUP PROTEIN DSP1 |
| Lsat_s160.g0009.t1 | PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED |
| Lsat_s160.g0010.t1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| Lsat_s160.g0011.t1 | |
| Lsat_s160.g0012.t1 | PEFLIN |
| Lsat_s160.g0013.t1 | PEFLIN |
| Lsat_s160.g0014.t1 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| Lsat_s160.g0015.t1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| Lsat_s160.g0016.t1 | |
| Lsat_s160.g0017.t1 | LP04239P |
| Lsat_s160.g0018.t1 | |
| Lsat_s161.g0001.t1 | LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 |
| Lsat_s161.g0002.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s161.g0003.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s161.g0004.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s161.g0005.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s161.g0006.t1 | |
| Lsat_s161.g0007.t1 | APOSPORY-ASSOCIATED PROTEIN C-RELATED |
| Lsat_s161.g0008.t1 | |
| Lsat_s161.g0009.t1 | CUBILIN-LIKE PROTEIN |
| Lsat_s161.g0010.t1 | NUCLEOPORIN AMO1-LIKE |
| Lsat_s161.g0011.t1 | |
| Lsat_s161.g0012.t1 | ANKYRIN REPEAT FAMILY PROTEIN |
| Lsat_s161.g0013.t1 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 9 ZCCHC9 |
| Lsat_s161.g0014.t1 | SHC TRANSFORMING PROTEIN |
| Lsat_s161.g0015.t1 | ACID CLUSTER PROTEIN 33 |
| Lsat_s161.g0016.t1 | |
| Lsat_s161.g0017.t1 | MONOACYLGLYCEROL LIPASE |
| Lsat_s161.g0018.t1 | ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 1 |
| Lsat_s161.g0019.t1 | NOTCH LIGAND FAMILY MEMBER |
| Lsat_s161.g0020.t1 | |
| Lsat_s162.g0001.t1 | |
| Lsat_s162.g0002.t1 | |
| Lsat_s162.g0003.t1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| Lsat_s162.g0004.t1 | |
| Lsat_s162.g0005.t1 | TYROSINE-PROTEIN KINASE |
| Lsat_s162.g0006.t1 | TELOMERASE RNA COMPONENT INTERACTING RNASE |
| Lsat_s162.g0007.t1 | DELTA ADAPTIN-RELATED |
