Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00028010 | |
| SKAU_T00028020 | ELKS/RAB6-INTERACTING/CAST PROTEIN |
| SKAU_T00028030 | |
| SKAU_T00028040 | |
| SKAU_T00028050 | |
| SKAU_T00028060 | |
| SKAU_T00028070 | |
| SKAU_T00028080 | |
| SKAU_T00028090 | |
| SKAU_T00028100 | |
| SKAU_T00028110 | |
| SKAU_T00028120 | NINJURIN-RELATED |
| SKAU_T00028130 | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED |
| SKAU_T00028140 | |
| SKAU_T00028150 | |
| SKAU_T00028160 | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED |
| SKAU_T00028170 | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED |
| SKAU_T00028180 | DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59 |
| SKAU_T00028190 | TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED |
| SKAU_T00028200 | PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTF |
| SKAU_T00028210 | |
| SKAU_T00028220 | FAM11A, B PROTEIN |
| SKAU_T00028230 | ROUND SPERMATID BASIC PROTEIN 1 |
| SKAU_T00028240 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
| SKAU_T00028250 | GAMMA-SECRETASE-ACTIVATING PROTEIN |
| SKAU_T00028260 | CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED |
| SKAU_T00028270 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00028280 | |
| SKAU_T00028290 | - |
| SKAU_T00028300 | UNCHARACTERIZED |
| SKAU_T00028310 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| SKAU_T00028320 | |
| SKAU_T00028330 | ARMADILLO REPEAT CONTAINING PROTEIN |
| SKAU_T00028340 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| SKAU_T00028350 | METALLOPROTEASE |
| SKAU_T00028360 | DNAJ HOMOLOG SUBFAMILY C MEMBER 2 |
| SKAU_T00028370 | DNAJ HOMOLOG SUBFAMILY C MEMBER 2 |
| SKAU_T00028380 | 26S PROTEASOME REGULATORY SUBUNIT |
| SKAU_T00028390 | SULFATE TRANSPORTER |
| SKAU_T00028400 | |
| SKAU_T00028410 | |
| SKAU_T00028420 | G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN |
| SKAU_T00028430 | GLYCOSYL HYDROLASE |
| SKAU_T00028440 | |
| SKAU_T00028450 | |
| SKAU_T00028460 | |
| SKAU_T00028470 | |
| SKAU_T00028480 | |
| SKAU_T00028490 | |
| SKAU_T00028500 | PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED |
