Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000028702.1 | RAS-RELATED PROTEIN RAB |
| ENSZWYP00000028703.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| ENSZWYP00000028704.1 | |
| ENSZWYP00000028705.1 | UPF0711 PROTEIN C18ORF21 |
| ENSZWYP00000028706.1 | B-BOX DOMAIN CONTAINING |
| ENSZWYP00000028707.1 | FTP DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000028708.1 | S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE |
| ENSZWYP00000028709.1 | RAS-RELATED PROTEIN RAB |
| ENSZWYP00000028710.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| ENSZWYP00000028711.1 | ANNEXIN |
| ENSZWYP00000028712.1 | |
| ENSZWYP00000028713.1 | BACTERIOHEMERYTHRIN |
| ENSZWYP00000028714.1 | RAS-RELATED PROTEIN RAB |
| ENSZWYP00000028715.1 | GUANYLYL CYCLASE |
| ENSZWYP00000028716.1 | |
| ENSZWYP00000028717.1 | ANNEXIN |
| ENSZWYP00000028718.1 | |
| ENSZWYP00000028719.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| ENSZWYP00000028720.1 | RAN GTPASE-ACTIVATING PROTEIN 1 |
| ENSZWYP00000028721.1 | RAS-RELATED PROTEIN RAB |
| ENSZWYP00000028722.1 | UNCHARACTERIZED |
| ENSZWYP00000028723.1 | |
| ENSZWYP00000028724.1 | YNEIN REGULATORY COMPLEX SUBUNIT 5 |
| ENSZWYP00000028725.1 | PROTEIN ECT2 |
| ENSZWYP00000028726.1 | CTF8, CHROMOSOME TRANSMISSION FIDELITY FACTOR 8 HOMOLOG (S. CEREVISIAE) |
| ENSZWYP00000028727.1 | SELENOPROTEIN T |
| ENSZWYP00000028728.1 | ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR |
| ENSZWYP00000028729.1 | F-BOX ONLY PROTEIN 42 |
| ENSZWYP00000028730.1 | |
| ENSZWYP00000028731.1 | FTP DOMAIN-CONTAINING PROTEIN |
| ENSZWYP00000028732.1 | |
| ENSZWYP00000028733.1 | |
| ENSZWYP00000028734.1 | ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR |
| ENSZWYP00000028735.1 | MONOCARBOXYLATE TRANSPORTER |
| ENSZWYP00000028736.1 | F-BOX ONLY PROTEIN 42 |
| ENSZWYP00000028737.1 | 5'->3' EXORIBONUCLEASE |
| ENSZWYP00000028738.1 | SODIUM/HYDROGEN EXCHANGER |
| ENSZWYP00000028739.1 | |
| ENSZWYP00000028740.1 | |
| ENSZWYP00000028741.1 | SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGEN |
| ENSZWYP00000028742.1 | CDC68 RELATED |
| ENSZWYP00000028743.1 | |
| ENSZWYP00000028744.1 | F-BOX ONLY PROTEIN 42 |
| ENSZWYP00000028745.1 | |
| ENSZWYP00000028746.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
| ENSZWYP00000028747.1 | RIBOSOME MATURATION PROTEIN SBDS |
| ENSZWYP00000028748.1 | HAT DIMERISATION DOMAIN, C-TERMINAL |
| ENSZWYP00000028749.1 | 5'->3' EXORIBONUCLEASE |
| ENSZWYP00000028750.1 | CENTAURIN/ARF |
| ENSZWYP00000028751.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
