About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Deep sea, Vent field2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504796%37,037

References
TitleJournalPubmed ID
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

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Gene IDDescription
RPACG26050.2
RPACG26051.1
RPACG26052.1UNCHARACTERIZED
RPACG26053.1
RPACG26054.1
RPACG26055.1
RPACG26056.1
RPACG26057.1
RPACG26058.1
RPACG26059.1
RPACG26060.1
RPACG26061.1
RPACG26062.1
RPACG26062.2
RPACG26062.3
RPACG26063.1
RPACG26064.1
RPACG26065.1
RPACG26066.1
RPACG26067.1MYC PROTO-ONCOGENE
RPACG26068.1TRNA DIMETHYLALLYLTRANSFERASE
RPACG26069.1
RPACG26070.1
RPACG26071.1
RPACG26072.1
RPACG26073.1CYSTEINE-RICH, ACIDIC INTEGRAL MEMBRANE PROTEIN-RELATED
RPACG26074.1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
RPACG26075.1SCY1-RELATED S/T PROTEIN KINASE-LIKE
RPACG26076.1
RPACG26077.1
RPACG26078.1ANTIBIOTIC RESISTANCE PROTEIN MCBG
RPACG26079.1
RPACG26080.1
RPACG26081.1
RPACG26082.1
RPACG26083.1
RPACG26084.1
RPACG26085.1
RPACG26086.1
RPACG26087.1G-PROTEIN COUPLED RECEPTOR
RPACG26088.1G-PROTEIN COUPLED RECEPTOR
RPACG26089.1G-PROTEIN COUPLED RECEPTOR
RPACG26090.1G-PROTEIN COUPLED RECEPTOR
RPACG26091.1
RPACG26092.1G-PROTEIN COUPLED RECEPTOR
RPACG26093.1G-PROTEIN COUPLED RECEPTOR
RPACG26094.1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
RPACG26095.1G-PROTEIN COUPLED RECEPTOR
RPACG26096.1
RPACG26097.1PR DOMAIN ZINC FINGER PROTEIN
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