About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_029792-T1NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
LLU|FUN_029793-T1OS10G0105400 PROTEIN
LLU|FUN_029794-T1
LLU|FUN_029795-T1
LLU|FUN_029796-T1
LLU|FUN_029797-T1DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER
LLU|FUN_029798-T1SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE
LLU|FUN_029799-T1COMM DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_029800-T1C1ORF73 PROTEIN
LLU|FUN_029801-T1METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
LLU|FUN_029802-T1CHAPERONIN
LLU|FUN_029803-T1LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN
LLU|FUN_029804-T1NUCLEAR HORMONE RECEPTOR
LLU|FUN_029805-T1EXPORTIN 1/5
LLU|FUN_029806-T1
LLU|FUN_029807-T1
LLU|FUN_029808-T1
LLU|FUN_029809-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_029810-T1BAND 7 PROTEIN-RELATED
LLU|FUN_029811-T1BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
LLU|FUN_029812-T1
LLU|FUN_029813-T1
LLU|FUN_029814-T1FUKUTIN RELATED PROTEIN
LLU|FUN_029815-T1FUKUTIN RELATED PROTEIN
LLU|FUN_029816-T1
LLU|FUN_029817-T1SERUM RESPONSE FACTOR HOMOLOG
LLU|FUN_029818-T1
LLU|FUN_029819-T1ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
LLU|FUN_029820-T1NADH DEHYDROGENASE
LLU|FUN_029821-T1
LLU|FUN_029822-T1
LLU|FUN_029823-T1ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 15
LLU|FUN_029824-T1
LLU|FUN_029825-T1KINESIN LIGHT CHAIN
LLU|FUN_029826-T1DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLS
LLU|FUN_029827-T1TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 2
LLU|FUN_029828-T1ANKYRIN REPEAT PROTEIN
LLU|FUN_029829-T1
LLU|FUN_029830-T1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE DSOR1-LIKE PROTEIN
LLU|FUN_029831-T1
LLU|FUN_029832-T1
LLU|FUN_029833-T1
LLU|FUN_029834-T1
LLU|FUN_029835-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_029836-T1-
LLU|FUN_029837-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_029838-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_029839-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_029840-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_029841-T1
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