About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254 the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS03051ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 11
HS03052ATP-DEPENDENT PROTEASE
HS03053
HS03054CADHERIN-23
HS03055ACYL-COA SYNTHETASE
HS03056MTG8 ETO EIGHT TWENTY ONE PROTEIN
HS03057EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
HS03058TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2
HS03059ARYLSULFATASE FAMILY MEMBER
HS03060MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
HS03061MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
HS03062DYNEIN LIGHT INTERMEDIATE CHAIN
HS03063CARBONIC ANHYDRASE
HS03064
HS03065
HS03066UBIQUITIN-ACTIVATING ENZYME E1
HS03067CADHERIN-23
HS03068RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
HS03069ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL
HS03070NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
HS03071EPH RECEPTOR A5
HS03072ADP RIBOSYLATION FACTOR-RELATED
HS03073HIGH-AFFINITY CHOLINE TRANSPORTER 1
HS03074POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
HS03075LIM DOMAIN ONLY PROTEIN 7
HS03076GLYPICAN
HS03077GLYPICAN
HS03078EPHRIN
HS03079CHEMOTACTIC RECEPTOR
HS03080CENTROMERE PROTEIN Q
HS0308150S/60S RIBOSOMAL PROTEIN L16
HS03082CNH DOMAIN CONTAINING
HS03083CULLIN
HS03084LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
HS03085RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
HS03086ADP-RIBOSYLGLYCOHYDROLASE
HS03087RP42 RELATED
HS03088POTASSIUM/PROTON ANTIPORTER-RELATED
HS03089SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT
HS03090-
HS03091LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN
HS03092LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN
HS03093RAS GTPASE-ACTIVATING PROTEINS
HS03094EXPRESSED PROTEIN
HS03095PEPTIDASE S8
HS03096HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
HS03097HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
HS03098DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
HS03099BASIC LEUCINE ZIPPER NUCLEAR FACTOR 1 BLZF1 PROTEIN
HS03100TRNA (GUANINE-9-) METHYLTRANSFERASE
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