About Lamellibrachia columna

Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia columnaAnnelida-Cold seep810-1,870cold seeps off the east coast of the North Island of New Zealand53616

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
wsLamColu1.1879.7MbChromosome2023CAVLEN01WELLCOME SANGER INSTITUTEPRJEB68353-32,318

Gene Information

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Gene IDDescription
ENSZWYP00000003102.1DPY-19-LIKE 1, LIKE (H. SAPIENS)
ENSZWYP00000003103.1ALDEHYDE DEHYDROGENASE
ENSZWYP00000003104.1SPONDIN
ENSZWYP00000003105.1CYSTATIN FAMILY MEMBER
ENSZWYP00000003106.1HYDROLASE
ENSZWYP00000003107.1
ENSZWYP00000003108.1PROTEIN CBG16327
ENSZWYP00000003109.1
ENSZWYP00000003110.1IP22168P
ENSZWYP00000003111.1
ENSZWYP00000003112.1LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN
ENSZWYP00000003113.1
ENSZWYP00000003114.1ACID AMIDASE
ENSZWYP00000003115.1CYSTATIN FAMILY MEMBER
ENSZWYP00000003116.1
ENSZWYP00000003117.1SPONDIN
ENSZWYP00000003118.1
ENSZWYP00000003119.1POTE ANKYRIN DOMAIN
ENSZWYP00000003120.1SOLUTE CARRIER FAMILY 39
ENSZWYP00000003121.1DED DOMAIN-CONTAINING PROTEIN
ENSZWYP00000003122.1LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN
ENSZWYP00000003123.1UNCHARACTERIZED
ENSZWYP00000003124.1SPONDIN
ENSZWYP00000003125.1
ENSZWYP00000003126.1CALPONIN
ENSZWYP00000003127.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
ENSZWYP00000003128.1E3 UBIQUITIN-PROTEIN LIGASE KCMF1
ENSZWYP00000003129.1ETS
ENSZWYP00000003130.1LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN
ENSZWYP00000003131.1OSTEOPETROSIS ASSOCIATED TRANSMEMBRANE PROTEIN 1
ENSZWYP00000003132.1
ENSZWYP00000003133.1
ENSZWYP00000003134.1RYANODINE RECEPTOR AND IP3 RECEPTOR
ENSZWYP00000003135.1
ENSZWYP00000003136.1ETS
ENSZWYP00000003137.1PROTEIN DISULFIDE ISOMERASE
ENSZWYP00000003138.1
ENSZWYP00000003139.1DYNAMIN
ENSZWYP00000003140.1PROMININ PROM PROTEIN
ENSZWYP00000003141.1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
ENSZWYP00000003142.130S/40S RIBOSOMAL PROTEIN S4
ENSZWYP00000003143.1
ENSZWYP00000003144.1DELTEX-RELATED
ENSZWYP00000003145.1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
ENSZWYP00000003146.1TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED
ENSZWYP00000003147.1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
ENSZWYP00000003148.1CUE DOMAIN CONTAINING 2
ENSZWYP00000003149.1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
ENSZWYP00000003150.1E3 UBIQUITIN-PROTEIN LIGASE KCMF1
ENSZWYP00000003151.1
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