Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)
Synaphobranchus kaupii Johnson, 1862
Feed on decapods, natantia, amphipods, fishes and cephalopods
Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90 | 76,800/519.8 | 42.5 | - | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00315010 | |
| SKAU_T00315020 | |
| SKAU_T00315030 | AGAP007712-PA |
| SKAU_T00315040 | |
| SKAU_T00315050 | |
| SKAU_T00315060 | |
| SKAU_T00315070 | KELCH PROTEIN |
| SKAU_T00315080 | |
| SKAU_T00315090 | |
| SKAU_T00315100 | |
| SKAU_T00315110 | |
| SKAU_T00315120 | |
| SKAU_T00315130 | DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00315140 | DNAJ HOMOLOG SUBFAMILY C MEMBER 24 |
| SKAU_T00315150 | PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED |
| SKAU_T00315160 | |
| SKAU_T00315170 | PAX6 NEIGHBOR PROTEIN PAXNEB |
| SKAU_T00315180 | |
| SKAU_T00315190 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| SKAU_T00315200 | RETICULOCALBIN |
| SKAU_T00315210 | |
| SKAU_T00315220 | F-BOX ONLY PROTEIN 3 |
| SKAU_T00315230 | NUCLEAR PORE COMPLEX PROTEIN NUP160 |
| SKAU_T00315240 | CYTOSOLIC CARBOXYPEPTIDASE |
| SKAU_T00315250 | MITOCHONDRIAL CARRIER HOMOLOG |
| SKAU_T00315260 | SYNAPTOTAGMIN |
| SKAU_T00315270 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| SKAU_T00315280 | ZINC FINGER PROTEIN |
| SKAU_T00315290 | PROTHROMBIN |
| SKAU_T00315300 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| SKAU_T00315310 | ACTIN |
| SKAU_T00315320 | GOLGI-ASSOCIATED PROTEIN GCP360-RELATED |
| SKAU_T00315330 | CALCIUM BINDING PROTEINS |
| SKAU_T00315340 | CALCIUM BINDING PROTEINS |
| SKAU_T00315350 | RETINAL CONE RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE GAMMA-SUBUNIT-RELATED |
| SKAU_T00315360 | |
| SKAU_T00315370 | |
| SKAU_T00315380 | |
| SKAU_T00315390 | - |
| SKAU_T00315400 | CARBOHYDRATE SULFOTRANSFERASE |
| SKAU_T00315410 | CARBOHYDRATE SULFOTRANSFERASE |
| SKAU_T00315420 | TRANSPOSON |
| SKAU_T00315430 | SI:CH211-196P9.1-RELATED |
| SKAU_T00315440 | |
| SKAU_T00315450 | AGAP001331-PA-RELATED |
| SKAU_T00315460 | EPM2A-INTERACTING PROTEIN 1 |
| SKAU_T00315470 | CRYPTOCHROME |
| SKAU_T00315480 | JNK-INTERACTING PROTEIN 1-LIKE PROTEIN |
| SKAU_T00315490 | |
| SKAU_T00315500 |
