Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00031510 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| SKAU_T00031520 | - |
| SKAU_T00031530 | CARNOSINE SYNTHASE 1 |
| SKAU_T00031540 | |
| SKAU_T00031550 | MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED |
| SKAU_T00031560 | FRUCTOSE-BISPHOSPHATE ALDOLASE |
| SKAU_T00031570 | RING FINGER PROTEIN-RELATED |
| SKAU_T00031580 | TRANSMEMBRANE PROTEIN 109 |
| SKAU_T00031590 | |
| SKAU_T00031600 | PRE-MRNA-PROCESSING FACTOR 19 |
| SKAU_T00031610 | VACUOLAR PROTON ATPASES |
| SKAU_T00031620 | SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG |
| SKAU_T00031630 | PHD/F-BOX CONTAINING PROTEIN |
| SKAU_T00031640 | SYNTAXIN |
| SKAU_T00031650 | RAN GTPASE |
| SKAU_T00031660 | NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL |
| SKAU_T00031670 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| SKAU_T00031680 | DNA REPAIR PROTEIN RAD9 |
| SKAU_T00031690 | |
| SKAU_T00031700 | |
| SKAU_T00031710 | P2X PURINOCEPTOR |
| SKAU_T00031720 | FACT COMPLEX SUBUNIT SSRP1 |
| SKAU_T00031730 | |
| SKAU_T00031740 | - |
| SKAU_T00031750 | |
| SKAU_T00031760 | |
| SKAU_T00031770 | - |
| SKAU_T00031780 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00031790 | THIOREDOXIN-RELATED |
| SKAU_T00031800 | - |
| SKAU_T00031810 | CALCIUM-TRANSPORTING ATPASE |
| SKAU_T00031820 | CALCIUM-TRANSPORTING ATPASE |
| SKAU_T00031830 | DNA POLYMERASE DELTA SUBUNIT 4 |
| SKAU_T00031840 | P2X PURINOCEPTOR |
| SKAU_T00031850 | |
| SKAU_T00031860 | CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P |
| SKAU_T00031870 | |
| SKAU_T00031880 | T-CELL RECEPTOR BETA CHAIN |
| SKAU_T00031890 | TAPASIN |
| SKAU_T00031900 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| SKAU_T00031910 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| SKAU_T00031920 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| SKAU_T00031930 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00031940 | PLAKOPHILLIN-RELATED |
| SKAU_T00031950 | BTB/POZ DOMAIN-CONTAINING PROTEIN 18 |
| SKAU_T00031960 | |
| SKAU_T00031970 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10 |
| SKAU_T00031980 | PROTEIN UNC-93 HOMOLOG B1 |
| SKAU_T00031990 | BETA/GAMMA CRYSTALLIN |
| SKAU_T00032000 | BETA/GAMMA CRYSTALLIN |
