About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g9563MYC PROTO-ONCOGENE
Chiridota_g9564TRNA DIMETHYLALLYLTRANSFERASE
Chiridota_g9565
Chiridota_g9566TRNA DIMETHYLALLYLTRANSFERASE
Chiridota_g956740S RIBOSOMAL PROTEIN S7
Chiridota_g9568ALCOHOL DEHYDROGENASE RELATED
Chiridota_g9569
Chiridota_g957CDNA SEQUENCE BC048562
Chiridota_g9570PRESEQUENCE PROTEASE
Chiridota_g9571PROTEIN CASC3
Chiridota_g9572
Chiridota_g9573CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Chiridota_g9574
Chiridota_g9575
Chiridota_g9576
Chiridota_g9577
Chiridota_g9578
Chiridota_g9579
Chiridota_g958
Chiridota_g9580HOMEOBOX PROTEIN ABDOMINAL-B
Chiridota_g9581
Chiridota_g9582
Chiridota_g9583BEIGE/BEACH-RELATED
Chiridota_g9584
Chiridota_g9585DNA LIGASE 4
Chiridota_g9586IOJAP SUPERFAMILY ORTHOLOG
Chiridota_g9587CARBOHYDRATE SULFOTRANSFERASE
Chiridota_g9588
Chiridota_g9589-
Chiridota_g959
Chiridota_g9590-
Chiridota_g9591-
Chiridota_g9592
Chiridota_g9593-
Chiridota_g9594PROTEIN CBG03580
Chiridota_g9595
Chiridota_g9596CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g9597-
Chiridota_g9598-
Chiridota_g9599
Chiridota_g96
Chiridota_g960
Chiridota_g9600
Chiridota_g9601COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Chiridota_g9602LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Chiridota_g9603
Chiridota_g9604
Chiridota_g9605
Chiridota_g9606NUCLEAR HORMONE RECEPTOR
Chiridota_g9607COILED-COIL DOMAIN-CONTAINING PROTEIN 103
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