Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00327510 | GATA-TYPE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00327520 | MYB-BINDING PROTEIN 1A FAMILY MEMBER |
| SKAU_T00327530 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |
| SKAU_T00327540 | |
| SKAU_T00327550 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
| SKAU_T00327560 | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING |
| SKAU_T00327570 | INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 |
| SKAU_T00327580 | |
| SKAU_T00327590 | |
| SKAU_T00327600 | FRIZZLED |
| SKAU_T00327610 | |
| SKAU_T00327620 | |
| SKAU_T00327630 | |
| SKAU_T00327640 | TYROSINE-PROTEIN KINASE BAZ1B |
| SKAU_T00327650 | TYROSINE-PROTEIN KINASE BAZ1B |
| SKAU_T00327660 | B9 DOMAIN-CONTAINING |
| SKAU_T00327670 | BCL7 RELATED |
| SKAU_T00327680 | TRANSDUCIN BETA-LIKE PROTEIN 2 |
| SKAU_T00327690 | HUNTINGTIN INTERACTING PROTEIN 1 |
| SKAU_T00327700 | |
| SKAU_T00327710 | PROTEIN YIPPEE-LIKE CG15309-RELATED |
| SKAU_T00327720 | AMPLIFIED IN BREAST CANCER 2-RELATED |
| SKAU_T00327730 | P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED |
| SKAU_T00327740 | SERINE/THREONINE/TYROSINE-INTERACTING-LIKE PROTEIN 1 |
| SKAU_T00327750 | TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA |
| SKAU_T00327760 | NITRIC OXIDE SYNTHASE-RELATED |
| SKAU_T00327770 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00327780 | RHOMBOID-RELATED PROTEIN |
| SKAU_T00327790 | RNA BINDING PROTEIN |
| SKAU_T00327800 | MATRIX METALLOPROTEINASE |
| SKAU_T00327810 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| SKAU_T00327820 | MYOSIN REGULATORY LIGHT CHAIN 2 |
| SKAU_T00327830 | CCAAT DISPLACEMENT PROTEIN-RELATED |
| SKAU_T00327840 | |
| SKAU_T00327850 | |
| SKAU_T00327860 | |
| SKAU_T00327870 | |
| SKAU_T00327880 | INTEGRATOR COMPLEX SUBUNIT 2 |
| SKAU_T00327890 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 |
| SKAU_T00327900 | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN |
| SKAU_T00327910 | RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00327920 | |
| SKAU_T00327930 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
| SKAU_T00327940 | PEPTIDYL-TRNA HYDROLASE 2 |
| SKAU_T00327950 | CLATHRIN HEAVY CHAIN RELATED |
| SKAU_T00327960 | SPERMATOGENESIS-ASSOCIATED PROTEIN 22 |
| SKAU_T00327970 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
| SKAU_T00327980 | |
| SKAU_T00327990 | |
| SKAU_T00328000 |
