About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_036784-T1
LLU|FUN_036785-T1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
LLU|FUN_036786-T1
LLU|FUN_036787-T1
LLU|FUN_036788-T1
LLU|FUN_036789-T1
LLU|FUN_036790-T1
LLU|FUN_036791-T1
LLU|FUN_036792-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
LLU|FUN_036793-T1
LLU|FUN_036794-T1
LLU|FUN_036795-T1MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE
LLU|FUN_036796-T1TANDEM PH DOMAIN CONTAINING PROTEIN
LLU|FUN_036797-T1
LLU|FUN_036798-T1
LLU|FUN_036799-T1
LLU|FUN_036800-T1
LLU|FUN_036801-T1
LLU|FUN_036802-T1MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE
LLU|FUN_036803-T1MYB-BINDING PROTEIN 1A FAMILY MEMBER
LLU|FUN_036804-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
LLU|FUN_036805-T1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
LLU|FUN_036806-T1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
LLU|FUN_036807-T1
LLU|FUN_036808-T1
LLU|FUN_036809-T1
LLU|FUN_036810-T1
LLU|FUN_036811-T1
LLU|FUN_036812-T1T-BOX PROTEIN-RELATED
LLU|FUN_036813-T1
LLU|FUN_036814-T1T-BOX PROTEIN-RELATED
LLU|FUN_036815-T1
LLU|FUN_036816-T1
LLU|FUN_036817-T1
LLU|FUN_036818-T1SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2
LLU|FUN_036819-T1MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
LLU|FUN_036820-T1
LLU|FUN_036821-T1
LLU|FUN_036822-T1
LLU|FUN_036823-T1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
LLU|FUN_036824-T1
LLU|FUN_036825-T1
LLU|FUN_036826-T1
LLU|FUN_036827-T1
LLU|FUN_036828-T1DIACYLGLYCEROL KINASE
LLU|FUN_036829-T1
LLU|FUN_036830-T1
LLU|FUN_036831-T1
LLU|FUN_036832-T1CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
LLU|FUN_036833-T1
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