Detailed information of PRJNA764822.B1

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B1

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Phyllobacterium sp.Chrysomallon squamiferum2,659,846 963-59.4756.281.231-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B1-PRJNA764822-MAG1871046-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig136_3IPRSCANIPR013813Endoribonuclease L-PSP/chorismate mutase-likecontig136CDS13311801-0
contig136_3PFAMPF14588YjgF/chorismate_mutase-like, putative endoribonucleasecontig136CDS13311801-0
contig136_4EggNOGCOG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TUTH@28211|AlphaproteobacteriaKcontig136CDS19452244+1
contig136_4KEGGK03566LysR family transcriptional regulator, glycine cleavage system transcriptional activatorcontig136CDS19452244+1
contig136_4GOGO:0003700;GO:0006355;DNA-binding transcription factor activity; regulation of DNA-templated transcription;contig136CDS19452244+1
contig136_4IPRSCANIPR000847Transcription regulator HTH, LysRcontig136CDS19452244+1
contig136_4PFAMPF00126Bacterial regulatory helix-turn-helix protein, lysR familycontig136CDS19452244+1
contig137_1EggNOGCOG0129@1|root,COG0129@2|Bacteria,1MUTQ@1224|Proteobacteria,2TRTQ@28211|Alphaproteobacteria,43IC6@69277|PhyllobacteriaceaeEcontig137CDS11674-10
contig137_1KEGGK01687dihydroxy-acid dehydratase [EC:4.2.1.9]contig137CDS11674-10
contig137_1GOGO:0016836;hydro-lyase activity;contig137CDS11674-10
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