Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig12_3PFAMPF03462PCRF domaincontig12CDS27333749-0
contig12_4EggNOGCOG0842@1|root,COG0842@2|Bacteria,1MUH1@1224|Proteobacteria,2TQSY@28211|Alphaproteobacteria,2JQC1@204441|RhodospirillalesVcontig12CDS37464561-0
contig12_4KEGGK09694lipooligosaccharide transport system permease proteincontig12CDS37464561-0
contig12_4GOGO:0016020;GO:0140359;membrane; ABC-type transporter activity;contig12CDS37464561-0
contig12_4IPRSCANIPR013525ABC-2 type transporter, transmembrane domaincontig12CDS37464561-0
contig12_4PFAMPF01061ABC-2 type transportercontig12CDS37464561-0
contig12_5EggNOGCOG0668@1|root,COG0668@2|Bacteria,1MY0I@1224|Proteobacteria,1RQKY@1236|Gammaproteobacteria,1XJP8@135619|OceanospirillalesMcontig12CDS45585700-0
contig12_5KEGGK22044moderate conductance mechanosensitive channelcontig12CDS45585700-0
contig12_5GOGO:0016020;GO:0055085;membrane; transmembrane transport;contig12CDS45585700-0
contig12_5IPRSCANIPR006685Mechanosensitive ion channel MscScontig12CDS45585700-0
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