About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Deep sea, Vent field2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504796%37,037

References
TitleJournalPubmed ID
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

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Gene IDDescription
RPACG00752.1
RPACG00752.2
RPACG00752.3
RPACG00753.1UNCHARACTERIZED
RPACG00753.2
RPACG00754.1NHL REPEAT-CONTAINING PROTEIN-RELATED
RPACG00755.1NHL REPEAT-CONTAINING PROTEIN-RELATED
RPACG00755.2
RPACG00756.1NHL REPEAT-CONTAINING PROTEIN-RELATED
RPACG00756.2
RPACG00756.3
RPACG00757.1NHL REPEAT-CONTAINING PROTEIN-RELATED
RPACG00758.1NHL REPEAT-CONTAINING PROTEIN-RELATED
RPACG00759.1NHL REPEAT-CONTAINING PROTEIN-RELATED
RPACG00760.1UNCHARACTERIZED
RPACG00761.1TAX1 BINDING PROTEIN-RELATED
RPACG00762.1
RPACG00763.1
RPACG00764.1POLYCYSTIN FAMILY MEMBER
RPACG00765.1
RPACG00766.1DUAL SPECIFICITY PROTEIN KINASE
RPACG00767.1
RPACG00768.1
RPACG00768.2
RPACG00768.3
RPACG00768.4
RPACG00769.1F-BOX/TPR REPEAT PROTEIN POF3
RPACG00770.1TESTIS-SPECIFIC GENE 13 PROTEIN
RPACG00771.1
RPACG00772.1
RPACG00773.1UNCHARACTERIZED
RPACG00773.2
RPACG00774.1
RPACG00775.1FTP DOMAIN-CONTAINING PROTEIN
RPACG00776.1FTP DOMAIN-CONTAINING PROTEIN
RPACG00776.2
RPACG00777.1
RPACG00778.1UNCHARACTERIZED
RPACG00779.1
RPACG00780.1
RPACG00781.1
RPACG00782.1
RPACG00783.1
RPACG00783.2
RPACG00783.3
RPACG00783.4
RPACG00783.5
RPACG00784.1
RPACG00785.1
RPACG00785.2
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