About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1966 1967 1968 1969 1970 1971 1972 1973 1974 1975 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides42219SMAD
Paelopatides42220RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides42221SMAD
Paelopatides42222ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides42226ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides42227KNIRPS-RELATED PROTEIN-RELATED
Paelopatides42228PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides42229-
Paelopatides42230-
Paelopatides42231LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2
Paelopatides42232PROTEIN CBG26694
Paelopatides42233-
Paelopatides42234BONUS, ISOFORM C-RELATED
Paelopatides42236-
Paelopatides42237REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42238FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Paelopatides42239-
Paelopatides42240FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides42241REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42242OS05G0310600 PROTEIN
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