About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1986 1987 1988 1989 1990 1991 1992 1993 1994 1995 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides42632PROTEIN CBG24663
Paelopatides42633NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides42634-
Paelopatides42635ACROSIN-RELATED
Paelopatides42636ACROSIN-RELATED
Paelopatides42637CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides42640TUMOR ENDOTHELIAL MARKER 7 RELATED
Paelopatides42641-
Paelopatides42642ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides42643MOLTING PROTEIN MLT-4
Paelopatides42644-
Paelopatides42645HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides42646HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides42647STAR-RELATED LIPID TRANSFER PROTEIN 9
Paelopatides42648BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides42649F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides42650REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42651-
Paelopatides42652SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides42653-
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