About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1990 1991 1992 1993 1994 1995 1996 1997 1998 1999 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides42716RNA HELICASE
Paelopatides42717RNA POLYMERASE II CTD PHOSPHATASE
Paelopatides4271828S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL
Paelopatides42719RNA-BINDING PROTEIN NOB1
Paelopatides42720UNCHARACTERIZED
Paelopatides42721CASEIN KINASE II SUBUNIT ALPHA
Paelopatides42722ORF PROTEIN
Paelopatides42723-
Paelopatides42724POL PROTEIN
Paelopatides42725-
Paelopatides42726-
Paelopatides42727-
Paelopatides42728-
Paelopatides42729RING FINGER PROTEIN 31-RELATED
Paelopatides42730E3 UBIQUITIN-PROTEIN LIGASE TRIM
Paelopatides42731-
Paelopatides42732DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Paelopatides42733YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides42734ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides42735DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
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