About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 2508 2509 2510 2511 2512 2513 2514 2515 2516 2517 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8047631.1L-THREONINE 3-DEHYDROGENASE
CAI8047632.1-
CAI8047633.1NADPH-DEPENDENT 7-CYANO-7-DEAZAGUANINE REDUCTASE
CAI8047634.1GNAT FAMILY, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G00765)-RELATED-RELATED
CAI8047635.1ABC TRANSPORTER ATP-BINDING PROTEIN ALBC-RELATED
CAI8047636.13-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED
CAI8047637.1METALLOPROTEASE
CAI8047638.1ENOYL-COA HYDRATASE
CAI8047639.1OBG GTPASE FAMILY
CAI8047640.1SERINE HYDROXYMETHYLTRANSFERASE
CAI8047641.1SERINE HYDROXYMETHYLTRANSFERASE
CAI8047642.1-
CAI8047643.1-
CAI8047644.1UNNAMED PRODUCT
CAI8047646.1STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1
CAI8047645.1-
CAI8047648.1STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1
CAI8047647.1STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1
CAI8047649.1TEKTIN
CAI8047650.1TEKTIN
TOP