Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00015010 | |
| SKAU_T00015020 | |
| SKAU_T00015030 | |
| SKAU_T00015040 | |
| SKAU_T00015050 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
| SKAU_T00015060 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| SKAU_T00015070 | |
| SKAU_T00015080 | UNCHARACTERIZED |
| SKAU_T00015090 | SERINE PROTEASE INHIBITOR, SERPIN |
| SKAU_T00015100 | PROTEIN CBG26694 |
| SKAU_T00015110 | |
| SKAU_T00015120 | OSTEOCLAST-STIMULATING FACTOR 1 |
| SKAU_T00015130 | T-CELL SURFACE GLYCOPROTEIN CD8 BETA CHAIN |
| SKAU_T00015140 | T-CELL SURFACE GLYCOPROTEIN CD8 BETA CHAIN |
| SKAU_T00015150 | |
| SKAU_T00015160 | |
| SKAU_T00015170 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| SKAU_T00015180 | GLUTAREDOXIN-1 |
| SKAU_T00015190 | FERREDOXIN-RELATED |
| SKAU_T00015200 | |
| SKAU_T00015210 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00015220 | KINESIN-RELATED PROTEIN 6 |
| SKAU_T00015230 | LD44032P |
| SKAU_T00015240 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
| SKAU_T00015250 | UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERER |
| SKAU_T00015260 | UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERER |
| SKAU_T00015270 | UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERER |
| SKAU_T00015280 | NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 |
| SKAU_T00015290 | UNCHARACTERIZED |
| SKAU_T00015300 | RNA BINDING PROTEIN |
| SKAU_T00015310 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00015320 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| SKAU_T00015330 | PROTEIN C9ORF135 |
| SKAU_T00015340 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
| SKAU_T00015350 | SYNTENIN RELATED |
| SKAU_T00015360 | PROTEIN FAM189A |
| SKAU_T00015370 | TIGHT JUNCTION PROTEIN |
| SKAU_T00015380 | |
| SKAU_T00015390 | |
| SKAU_T00015400 | |
| SKAU_T00015410 | FRATAXIN |
| SKAU_T00015420 | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE |
| SKAU_T00015430 | THAP DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00015440 | |
| SKAU_T00015450 | |
| SKAU_T00015460 | PROTEIN CBG26694 |
| SKAU_T00015470 | FI21225P1 |
| SKAU_T00015480 | |
| SKAU_T00015490 | FI21225P1 |
| SKAU_T00015500 |
