Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00014010 | AGGRECAN/VERSICAN PROTEOGLYCAN |
| SKAU_T00014020 | AGGRECAN/VERSICAN PROTEOGLYCAN |
| SKAU_T00014030 | DNA REPAIR PROTEIN XRCC4 |
| SKAU_T00014040 | |
| SKAU_T00014050 | |
| SKAU_T00014060 | |
| SKAU_T00014070 | |
| SKAU_T00014080 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00014090 | |
| SKAU_T00014100 | |
| SKAU_T00014110 | |
| SKAU_T00014120 | UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 |
| SKAU_T00014130 | |
| SKAU_T00014140 | |
| SKAU_T00014150 | |
| SKAU_T00014160 | |
| SKAU_T00014170 | |
| SKAU_T00014180 | |
| SKAU_T00014190 | |
| SKAU_T00014200 | |
| SKAU_T00014210 | CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER |
| SKAU_T00014220 | |
| SKAU_T00014230 | |
| SKAU_T00014240 | PROTEIN KINASE C-BINDING PROTEIN 1 |
| SKAU_T00014250 | |
| SKAU_T00014260 | SMALL INDUCIBLE CYTOKINE A |
| SKAU_T00014270 | SMALL INDUCIBLE CYTOKINE A |
| SKAU_T00014280 | RUN AND SH3 DOMAIN CONTAINING |
| SKAU_T00014290 | RUN AND SH3 DOMAIN CONTAINING |
| SKAU_T00014300 | RUN AND SH3 DOMAIN CONTAINING |
| SKAU_T00014310 | RUN AND SH3 DOMAIN CONTAINING |
| SKAU_T00014320 | |
| SKAU_T00014330 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| SKAU_T00014340 | PROTEIN UNC-13 HOMOLOG |
| SKAU_T00014350 | |
| SKAU_T00014360 | PROTEIN UNC-13 HOMOLOG |
| SKAU_T00014370 | |
| SKAU_T00014380 | |
| SKAU_T00014390 | GH03947P |
| SKAU_T00014400 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
| SKAU_T00014410 | PROTEASE M1 ZINC METALLOPROTEASE |
| SKAU_T00014420 | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 |
| SKAU_T00014430 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| SKAU_T00014440 | SINGLE STRANDED DNA BINDING PROTEIN |
| SKAU_T00014450 | |
| SKAU_T00014460 | |
| SKAU_T00014470 | |
| SKAU_T00014480 | ARGININE OR CREATINE KINASE |
| SKAU_T00014490 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00014500 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
