About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Deep sea, Vent field2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504796%37,037

References
TitleJournalPubmed ID
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

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Gene IDDescription
RPACG01617.1
RPACG01618.1
RPACG01619.1
RPACG01620.1SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
RPACG01621.1
RPACG01622.1
RPACG01623.1TRANSDUCIN-LIKE ENHANCER PROTEIN
RPACG01624.1PROLINE-RICH PROTEIN PRCC
RPACG01625.1
RPACG01626.1
RPACG01627.1MISEXPRESSION SUPPRESSOR OF RAS 6
RPACG01628.1MISEXPRESSION SUPPRESSOR OF RAS 6
RPACG01629.1
RPACG01630.1
RPACG01631.1
RPACG01632.1
RPACG01633.1
RPACG01634.1
RPACG01635.1
RPACG01636.1
RPACG01637.1
RPACG01638.1
RPACG01639.1
RPACG01640.1POTE ANKYRIN DOMAIN
RPACG01640.2
RPACG01641.1
RPACG01642.1EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
RPACG01643.1
RPACG01644.1
RPACG01644.2
RPACG01644.3
RPACG01645.1
RPACG01646.1
RPACG01646.2
RPACG01647.1
RPACG01648.1
RPACG01649.1POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP
RPACG01650.1BTB/POZ DOMAIN-CONTAINING
RPACG01650.2BTB/POZ DOMAIN-CONTAINING
RPACG01651.1CYTOCHROME C OXIDASE POLYPEPTIDE
RPACG01652.1JTB PROTEIN-RELATED
RPACG01653.1HELIX LOOP HELIX PROTEIN 21-RELATED
RPACG01653.2
RPACG01653.3
RPACG01654.1SUPERKILLER 3 PROTEIN-RELATED
RPACG01655.1SERINE/THREONINE-PROTEIN KINASE
RPACG01656.1
RPACG01657.1NEUROTRANSMITTER GATED ION CHANNEL
RPACG01658.1
RPACG01659.1
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